| Gene: Ddx31 | ID: uc008izg.1_intron_7_0_chr2_28711757_f.3p | SPECIES: mm9 |
|
|
|
(4) PIWI.ip |
(1) PIWI.mut |
(9) TESTES |
| TGTGTAGCTCTGATCTCGACTGCAGTAATAACTGTAGGCGGTGCTTCGGAGCCACCTGATTGCATCTGCACAGAAACTCCCCACATACTGGAGACACTTAGTGTTCCCTGCTGTAGATTGGCTTTTGCTAGGAACTTAGGATCAGCTCTGCTTCGAGGGAAGTGGCTTTATGTTGATTGTGGTCTGGTATTTTTATATAGCCATTCACCTGGATTGTTCCTGGAGTGTTGATGGGTGGAGAGAAGAGGAA ......................................................................................................(((((..((...((.....))...))..))))).((.(((((((.(((((((....)))))))......))))))).))..................................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................TGTTCCCTGCTGTAGATTGGCTTTTGCTAGGAACTTAGGATCAGCTCTGCTT................................................................................................. | 52 | 1 | 148.00 | 148.00 | 148.00 | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................TGGATTGTTCCTGGAGTGTTGATGGG............... | 26 | 1 | 3.00 | 3.00 | - | 1.00 | - | 1.00 | - | - | - | - | 1.00 |
| .................................................................................................................................................................................................................TGGATTGTTCCTGGAGTGTTGATGGGTG............. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TGGAGTGTTGATGGGTGGAGAGAAGA.... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................CCTGGATTGTTCCTGGAGTGTTGATGG................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TTCCTGGAGTGTTGATGGGTGGAGAG........ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................................................................................................................................................................CTGGATTGTTCCTGGAGTGTTGATGG................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| ....................................................................................................................................................................................................................ATTGTTCCTGGAGTGTTGATGGGT.............. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - |
| TGTGTAGCTCTGATCTCGACTGCAGTAATAACTGTAGGCGGTGCTTCGGAGCCACCTGATTGCATCTGCACAGAAACTCCCCACATACTGGAGACACTTAGTGTTCCCTGCTGTAGATTGGCTTTTGCTAGGAACTTAGGATCAGCTCTGCTTCGAGGGAAGTGGCTTTATGTTGATTGTGGTCTGGTATTTTTATATAGCCATTCACCTGGATTGTTCCTGGAGTGTTGATGGGTGGAGAGAAGAGGAA ......................................................................................................(((((..((...((.....))...))..))))).((.(((((((.(((((((....)))))))......))))))).))..................................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................GTTCCTGGAGTGTTGAg................... | 17 | g | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - |