| Gene: AK011283 | ID: uc008ivy.1_intron_1_0_chr2_26493616_r.5p | SPECIES: mm9 |
|
|
(6) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(23) TESTES |
| TTCCCTAGGAAGCTTGCCTGCCAGAAAGAAAGCGCCTGTTGGGCTATTAGGTGAGTTGGGCTATTAGGTGAGTTGGGCTATTAGGTGAGTTGACTCAAAGTTACTAAGATTCGCATTAACAGTCACGGTGTGGCACCCAGCACTTGCTTCATCGACACCCTGCTCCTAGAGGCGTTGCAGGTGTGGCTGCTGTGTCACATGTGCGTCAGTAGGTGGCAGAGAGAAAAGAGGCTATGTCTACGCTCAGTGT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................CCTGCTCCTAGAGGCGTTGCAGGTGTGGCTGCTGTGTCACATGTGCGTCAGT........................................ | 52 | 1 | 140.00 | 140.00 | 140.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................CCCTGCTCCTAGAGGCGTTGCAGGTGTGGCTGCTGTGTCACATGTGCGTCAG......................................... | 52 | 1 | 89.00 | 89.00 | 54.00 | 35.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................CCTGCTCCTAGAGGCGTTGCA....................................................................... | 21 | 1 | 5.00 | 5.00 | - | - | 3.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................CCTGCTCCTAGAGGCG............................................................................ | 16 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................TATTAGGTGAGTTGGGCTATTAGGTGA.................................................................................................................................................................. | 27 | 2 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................TATTAGGTGAGTTGGGCTATTAGGa.................................................................................................................................................................... | 25 | a | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............TGCCTGCCAGAAAGAAAGCGCCTGTT.................................................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................CAGAAAGAAAGCGCCTGTTGGGCTATTAG........................................................................................................................................................................................................ | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................TTAGGTGAGTTGGGCTATTAGGaaa.................................................................................................................................................................. | 25 | aaa | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................GAAAGAAAGCGCCTGTTGGGCTATTAG........................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................CCCTGCTCCTAGAGGCGTT.......................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................................................................................................................................TGCTCCTAGAGGCGTTGCAGGTGTGGCTGCTGTGTCACATGTGCGTCAGTAG...................................... | 52 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................CCTGCTCCTAGAGGCGTTGCAGGTGTGGCTGC............................................................ | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................GTGAGTTGGGCTATTAGGTGAGTTG.............................................................................................................................................................. | 25 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................CCCTGCTCCTAGAGGCGT........................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................AAAGAAAGCGCCTGTTGGGCTATTAGG....................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................CCTGCCAGAAAGAAAGCGCCTGTTGGGCT............................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................CCCTGCTCCTAGAGGCG............................................................................ | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TGGGCTATTAGGTGAGTTGACT........................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TAGGTGAGTTGGGCTATTA....................................................................................................................................................................... | 19 | 2 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................GCTTCATCGACACCCcaa....................................................................................... | 18 | caa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................................................................................................CCTGCTCCTAGAGGCGT........................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................CCTGCTCCTAGAGGCGTTGCAGGTGTG................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................TGAGTTGGGCTATTAGGT.................................................................................................................................................................... | 18 | 2 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................CCTGCTCCTAGAGGCGTTG......................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................CCTGCTCCTAGAGGCGTTGCAGGTGTGG................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................CTGCTCCTAGAGGCGTTGCAGGTGTGGCTGCTGTGTCACATGTGCGTCAGTA....................................... | 52 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................CCTGCTCCTAGAGGCGTTGCAGGTGTGGCTGCTGT......................................................... | 35 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TGCTTCATCGACACCCTGCTCCTAGA................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................AGAGAGAAAAGAGGCTATGTCT........... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................CGTCAGTAGGTGGCAGAGAGAAAAGAGGC.................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........GAAGCTTGCCTGCCAGAAAGAAAGCGC....................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................CCCTGCTCCTAGAGGCGTTGCA....................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................GAAAGCGCCTGTTGGGCTATTAGG....................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................AGTAGGTGGCAGAGAGAAAAGAGGCT................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................TATTAGGTGAGTTGGGCTATTAGGTG................................................................................................................................................................... | 26 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................................................................................................................................................CACATGTGCGTCAGTAGG..................................... | 18 | 6 | 0.83 | 0.83 | - | - | 0.67 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................CGTTGCAGGTGTGGCTGCTGTGTC...................................................... | 24 | 3 | 0.67 | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.67 | - | - |
| ...................................................................................................................................................................................................CACATGTGCGTCAGTAGGTG................................... | 20 | 6 | 0.67 | 0.67 | - | - | - | - | 0.67 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................TGTGCGTCAGTAGGTGGCAG............................... | 20 | 7 | 0.57 | 0.57 | - | - | - | 0.43 | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................GTGTGGCTGCTGTGTCACATGTGCGTCAGTAGGTG................................... | 35 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................ATGTGCGTCAGTAGGTGGCAGAGAGA.......................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| .................................................................................................................................................................................................GTCACATGTGCGTCAGTAGGTGGCAGAGAGA.......................... | 31 | 2 | 0.50 | 0.50 | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TGCGTCAGTAGGTGGCAGAGAGA.......................... | 23 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................GGCGTTGCAGGTGTGGCTGCT........................................................... | 21 | 4 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................ATGTGCGTCAGTAGGTGGC................................. | 19 | 8 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................ATGTGCGTCAGTAGGTGGCAGAGA............................ | 24 | 5 | 0.40 | 0.40 | - | - | - | 0.40 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................CACATGTGCGTCAGTAGGTGGC................................. | 22 | 6 | 0.33 | 0.33 | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................ATGTGCGTCAGTAGGTGGCAGA.............................. | 22 | 6 | 0.33 | 0.33 | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - |
| .............................................................................................................................................................................................CTGTGTCACATGTGCGTCAGTAGGTG................................... | 26 | 4 | 0.25 | 0.25 | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................TGTGTCACATGTGCGTCAGTAG...................................... | 22 | 8 | 0.25 | 0.25 | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 | - | - |
| .....................................................................................................................................................................................................CATGTGCGTCAGTAGGTGGC................................. | 20 | 8 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................TGTGCGTCAGTAGGTGGCAGAGA............................ | 23 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 |
| ....................................................................................................................................................................................................ACATGTGCGTCAGTAGGTGGCAG............................... | 23 | 5 | 0.20 | 0.20 | - | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................CCCTGCTCCTAGAGGC............................................................................. | 16 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................TATGTCTACGCTCAGTGT | 18 | 6 | 0.17 | 0.17 | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................CTATGTCTACGCTCA.... | 15 | 6 | 0.17 | 0.17 | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................GTGGCAGAGAGAAAAGA..................... | 17 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................GAGGCTATGTCTACGCTCAGTGT | 23 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................GTCACATGTGCGTCAGTAGG..................................... | 20 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................TGTGCGTCAGTAGGTGGCAGAG............................. | 22 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................CGTCAGTAGGTGGCAGAGA............................ | 19 | 13 | 0.15 | 0.15 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.15 | - |
| ...........................................................................................................................................................................................................CGTCAGTAGGTGGCAGA.............................. | 17 | 14 | 0.14 | 0.14 | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................TGTCACATGTGCGTCAGTAG...................................... | 20 | 8 | 0.12 | 0.12 | - | - | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................CCTGCTCCTAGAGGC............................................................................. | 15 | 15 | 0.07 | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.07 | - | - | - | - | - | - | - | - |
| TTCCCTAGGAAGCTTGCCTGCCAGAAAGAAAGCGCCTGTTGGGCTATTAGGTGAGTTGGGCTATTAGGTGAGTTGGGCTATTAGGTGAGTTGACTCAAAGTTACTAAGATTCGCATTAACAGTCACGGTGTGGCACCCAGCACTTGCTTCATCGACACCCTGCTCCTAGAGGCGTTGCAGGTGTGGCTGCTGTGTCACATGTGCGTCAGTAGGTGGCAGAGAGAAAAGAGGCTATGTCTACGCTCAGTGT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................CAAAGTTACTAAGATTCGCATTAACA................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................AGTTGACTCAAAGTTACTAAGATTCGCA....................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |