| Gene: AK011283 | ID: uc008ivy.1_intron_0_0_chr2_26493154_r | SPECIES: mm9 |
|
|
|
(4) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(20) TESTES |
| TTGGTGACTAAAGTCTGCTTATGCCAAATGCCCAGCAATGTCCAGTTGAGGTAAGAGGTAGGCTGGAGCATGCTCAGATGGGATGTGAGTGGCTGCCCTAAAGATGCTGTCCTAGATCAGCACCACAGGCATGGCACAGCTGCTCAGCTGAGCCTGTGACATTGGGGCAAAGAGCAAGTGGCTGTTTCTACGCTCAGTGCTCAGAAGCCCGTGAGCACTAAGAATGGTTTGTAGCCTGACATTTTGCAGAGCCGTGGTGGGAAGGCACTGGGTTTTGCTTTGATGCTGTTGGCCAGACCCCAGTGTCAAACCTCTAGGGCTCACCAAAGGGTTGCATGGTCAGCATTTTAGGGAGATAGAACTTTGGAAGTGGAGGGAGATAGAAATTAAGTTTTCTAGGAGACATCCTGAGGGACTGGAAAAATACAAGAAACTCTCCATTCCTTTCATCTTCCAGATCCAGGAGCCAGGAAGAAGGGGGGCTACTTGGCCAACATGGCTGATCAC ............................................................................................................................................................................................................................................................................................................................................................................(((((((((((((((.((((((......))))))(((((..(((....))).((........))......))))).))))))))).))))))................................................... .....................................................................................................................................................................................................................................................................................................................................................................358................................................................................................457................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT2() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................GCTGCCCTAAAGATGCTGTCCTAGATCAGCACCACAGGCATGGCACAGCTGC............................................................................................................................................................................................................................................................................................................................................................................ | 52 | 1 | 1368.00 | 1368.00 | 817.00 | 551.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................GAAGCCCGTGAGCACTAAGAATGGTTTGTAG................................................................................................................................................................................................................................................................................. | 31 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TGACATTGGGGCAAAGAGCAAGTGGCTG................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 6.00 | 6.00 | - | - | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................GAGCACTAAGAATGGTTTGTAGCCTGACATTT....................................................................................................................................................................................................................................................................... | 32 | 1 | 3.00 | 3.00 | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................................................................................................................................CTGAGCCTGTGACATTGG...................................................................................................................................................................................................................................................................................................................................................... | 18 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................TAGAACTTTGGAAGTGGAGGGAGATA............................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .............................................................................................................................................................GACATTGGGGCAAAGAGCAAGTGa...................................................................................................................................................................................................................................................................................................................................... | 24 | a | 2.00 | 0.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................GAATGGTTTGTAGCCTGACATTT....................................................................................................................................................................................................................................................................... | 23 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 |
| .......................................................................................................................................................................................................................CACTAAGAATGGTTTGTAGCCTGACATTTT...................................................................................................................................................................................................................................................................... | 30 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................TAGGAGACATCCTGAGGGACTGGAAAA.................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGAGGTAGGCTGGAGCATGCTCAGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................... | 30 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................ATGGTTTGTAGCCTGACAaca....................................................................................................................................................................................................................................................................... | 21 | aca | 2.00 | 0.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................CCGTGAGCACTAAGAATGGTTTGTAGCCTGACATTT....................................................................................................................................................................................................................................................................... | 36 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................AGCACTAAGAATGGTTTGTAGC................................................................................................................................................................................................................................................................................ | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................CCTGTGACATTGGGGCAAAGAGCAAGTGG...................................................................................................................................................................................................................................................................................................................................... | 29 | 2 | 1.50 | 1.50 | - | - | - | - | - | - | 1.00 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................TAGGGAGATAGAACTTTGGAAGTGGAG.................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................TAGGGAGATAGAACTTTGGAAGTGGA..................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................CTTATGCCAAATGCCCAGCAATGTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAGATCCAGGAGCCAGGAAGAA............................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................GTAGGCTGGAGCATGCTCAGATGGGt........................................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | t | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................TTTGATGCTGTTGGCCAGA.................................................................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................AATGGTTTGTAGCCTGACATTT....................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................TTTAGGGAGATAGAAagt............................................................................................................................................... | 18 | agt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................ATGGTTTGTAGCCTGACATTTTGCAGAGC............................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................AACTTTGGAAGTGGAGGGAGATAGAAAT........................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................GTTTGTAGCCTGACATTTTGCAGAGCCGTGGTG........................................................................................................................................................................................................................................................ | 33 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................CTAAGAATGGTTTGTAGCCTGACATTT....................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................................................................................................................................................TGGTTTGTAGCCTGACATTTTGCAGAGCC.............................................................................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................TGAGCACTAAGAATGGTTTGTAGCCTGACATTT....................................................................................................................................................................................................................................................................... | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................TGTGACATTGGGGCAAAGAGCAAGT........................................................................................................................................................................................................................................................................................................................................ | 25 | 2 | 1.00 | 1.00 | - | - | - | - | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................................TTAGGGAGATAGAACTTTGGAAGTGGA..................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................TAGATCAGCACCACAGGCATGGCACAGC............................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................GCACTAAGAATGGTTTGTAGCCTGACATTT....................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................TGTGACATTGGGGCAAAGAGCAAGTGGCTGTTTC............................................................................................................................................................................................................................................................................................................................... | 34 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGAGGTAGGCTGGAGCATGCTCAGATGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................ | 33 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................TAGAACTTTGGAAGTGGAGGGAGA............................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................TCAGAAGCCCGTGAGCACTAAGAATGGTTT..................................................................................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................TCAGAAGCCCGTGAGCACTAAGAATGt........................................................................................................................................................................................................................................................................................ | 27 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................CTAGATCAGCACCACAGGCATGGCACA................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................TCAGCTGAGCCTGTGACATTGGGG.................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TAGGCTGGAGCATGCTCAGATGGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................TAGGAGACATCCTGAGGGACTGGAAA..................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................TGTGACATTGGGGCAAAGAGCAAGTGGCTGT.................................................................................................................................................................................................................................................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TGACATTGGGGCAAAGAGCAAGTGGCT.................................................................................................................................................................................................................................................................................................................................... | 27 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................TTGTAGCCTGACATTTTGC.................................................................................................................................................................................................................................................................... | 19 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................TTGGGGCAAAGAGCAAGTGG...................................................................................................................................................................................................................................................................................................................................... | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TGACATTGGGGCAAAGAGCAAGTGGC..................................................................................................................................................................................................................................................................................................................................... | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................TGTGACATTGGGGCAAAGAG............................................................................................................................................................................................................................................................................................................................................. | 20 | 2 | 0.50 | 0.50 | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................TGTGACATTGGGGCAAAGAGCA........................................................................................................................................................................................................................................................................................................................................... | 22 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................CTGTGACATTGGGGCAAAGAGCA........................................................................................................................................................................................................................................................................................................................................... | 23 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| TTGGTGACTAAAGTCTGCTTATGCCAAATGCCCAGCAATGTCCAGTTGAGGTAAGAGGTAGGCTGGAGCATGCTCAGATGGGATGTGAGTGGCTGCCCTAAAGATGCTGTCCTAGATCAGCACCACAGGCATGGCACAGCTGCTCAGCTGAGCCTGTGACATTGGGGCAAAGAGCAAGTGGCTGTTTCTACGCTCAGTGCTCAGAAGCCCGTGAGCACTAAGAATGGTTTGTAGCCTGACATTTTGCAGAGCCGTGGTGGGAAGGCACTGGGTTTTGCTTTGATGCTGTTGGCCAGACCCCAGTGTCAAACCTCTAGGGCTCACCAAAGGGTTGCATGGTCAGCATTTTAGGGAGATAGAACTTTGGAAGTGGAGGGAGATAGAAATTAAGTTTTCTAGGAGACATCCTGAGGGACTGGAAAAATACAAGAAACTCTCCATTCCTTTCATCTTCCAGATCCAGGAGCCAGGAAGAAGGGGGGCTACTTGGCCAACATGGCTGATCAC ............................................................................................................................................................................................................................................................................................................................................................................(((((((((((((((.((((((......))))))(((((..(((....))).((........))......))))).))))))))).))))))................................................... .....................................................................................................................................................................................................................................................................................................................................................................358................................................................................................457................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT2() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................GGCTGCCCTAAAGATGCTGTCCTAGA....................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................CAAGTGGCTGTTTCTACGCTCAGTGCTCA................................................................................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |