(5)
OTHER.mut
(6)
PIWI.ip
(2)
PIWI.mut
(29)
TESTES

Sense strand
TGAATCTGGGCTTGTCCCGTGTGGATGACGCCGTGGCCGCCAGGCACCCGGTGAGAAGGCTAGCCTGGGGGCCAGAGAGCTGACCCTACGATGCTGACCTGAGGCAAAGTAGAGGCAGGGGAAGCCCTGTCAGGGAGTGGAGGAGTGGGGGAACCCTCCTGACTTAGGGATAGGGCACGCTAAATGGGTTTAGGGGAGGGTGGAATATATCCATTCTCCCTCGCCAAGGCCAGGTCGTGGCTAAAGGAGAAGCAGGAGGCGAGGAAAGAGAACTGAGCCACGAACACCTTCCCCGCCCCCTAATCCCAGGGACTCGAGGAATTTGCTGCCTGCCAGTCGCACGCCTTCATGAAGGGCGT
.....................................................................................................................................................................................................................((((((...((((.(((...))).))))....))))))..(((.((((.((((......................)))).)))).)))..........................................................
.................................................................................................................................................................................................................210................................................................................................309................................................
Size Perfect hit Total Norm Perfect Norm SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)
mjTestesWT3()
Testes Data. (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGC................................................................................................................................................................................................................................................... 25 1 44.00 44.00 9.00 13.00 5.00 - 5.00 4.00 2.00 - 2.00 - - - 1.00 1.00 - - - - - 1.00 - 1.00 - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGCA.................................................................................................................................................................................................................................................. 26 1 34.00 34.00 10.00 8.00 6.00 - 3.00 2.00 - - - - 3.00 - - - - - - - - - - - - 1.00 - - - - 1.00
...................................................................................................................................................................................................................................GGCCAGGTCGTGGCTAAAGGAGAAGCAGGAGGCGAGGAAAGAGAACTGAGCC................................................................................ 52 1 22.00 22.00 - - - 22.00 - - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................TGACTTAGGGATAGGGCACGCTAAAT.............................................................................................................................................................................. 26 1 17.00 17.00 6.00 6.00 3.00 - 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................................TCCCAGGGACTCGAGGAATTTGCTGC.............................. 26 1 12.00 12.00 - - - - - - 3.00 - 2.00 3.00 - 2.00 - - - - - - - - 1.00 - 1.00 - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGCAt................................................................................................................................................................................................................................................. 27 t 10.00 34.00 2.00 4.00 1.00 - 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGG.................................................................................................................................................................................................................................................... 24 1 8.00 8.00 - - 1.00 - - - 1.00 3.00 - - - - - 1.00 1.00 1.00 - - - - - - - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGCAG................................................................................................................................................................................................................................................. 27 1 5.00 5.00 1.00 - 4.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGCAtt................................................................................................................................................................................................................................................ 28 tt 3.00 34.00 1.00 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGCt.................................................................................................................................................................................................................................................. 26 t 3.00 44.00 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................GCTGACCTGAGGCAAAGTAGA...................................................................................................................................................................................................................................................... 21 1 3.00 3.00 - - - - - - - 3.00 - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................................TCCCAGGGACTCGAGGAATTTGCTGCCT............................ 28 1 3.00 3.00 2.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGCAGt................................................................................................................................................................................................................................................ 28 t 3.00 5.00 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................ACCTGAGGCAAAGTAGAGG.................................................................................................................................................................................................................................................... 19 1 2.00 2.00 - - - - - - - - - - - - - - - - 2.00 - - - - - - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGCAtc................................................................................................................................................................................................................................................ 28 tc 2.00 34.00 - - - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................TGACTTAGGGATAGGGCACGCTAAA............................................................................................................................................................................... 25 1 2.00 2.00 - - 2.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................GCTGACCTGAGGCAAAGTAGAGGCA.................................................................................................................................................................................................................................................. 25 1 2.00 2.00 - - - - - 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGCAGG................................................................................................................................................................................................................................................ 28 1 2.00 2.00 - - - - - 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - -
............................................................................................................................................................TCCTGACTTAGGGATAGGGCACGCTAAtt.............................................................................................................................................................................. 29 tt 2.00 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................TGACCTGAGGCAAAGTAGAGGCAGGG............................................................................................................................................................................................................................................... 26 1 2.00 2.00 - - - - - - - - - - - - 1.00 - 1.00 - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................................TCCCAGGGACTCGAGGAATTTGCTGCC............................. 27 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...............................................................................................................................................................TGACTTAGGGATAGGGCACGCTAAATt............................................................................................................................................................................. 27 t 1.00 17.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................TAGGGCACGCTAAATGGGTTTAGG..................................................................................................................................................................... 24 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................ACTGAGCCACGAACACCTTCCCCGt............................................................... 25 t 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGa.................................................................................................................................................................................................................................................... 24 a 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................TAGGGCACGCTAAATGGGTTTAGGGGc.................................................................................................................................................................. 27 c 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................TCCTGACTTAGGGATAGGGCACGCTAA................................................................................................................................................................................ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGtt.................................................................................................................................................................................................................................................. 26 tt 1.00 8.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................TCCTGACTTAGGGATAGGGCACGCT.................................................................................................................................................................................. 25 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................TAAATGGGTTTAGGGGAGGGTGGA........................................................................................................................................................... 24 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................TCCTGACTTAGGGATAGGGCACGCTt................................................................................................................................................................................. 26 t 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................................................................AACTGAGCCACGAACACCTTCCCCGta.............................................................. 27 ta 1.00 0.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.............................................................................................CTGACCTGAGGCAAAGTAGAGGCAGGGaa............................................................................................................................................................................................................................................. 29 aa 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
.....................TGGATGACGCCGTGGCCGCCAGGCACC....................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
...............................CGTGGCCGCCAGGCACCCGGT................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGCAttt............................................................................................................................................................................................................................................... 29 ttt 1.00 34.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGCAat................................................................................................................................................................................................................................................ 28 at 1.00 34.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................GACTTAGGGATAGGGCACGC................................................................................................................................................................................... 20 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
...............................................................................................................................................................TGACTTAGGGATAGGGCACGCTAAATGG............................................................................................................................................................................ 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................................................................GTCGTGGCTAAAGGAGct............................................................................................................ 18 ct 1.00 0.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
........................................................................................................................................................................................................TGGAATATATCCATTCTCCCTCGCCAA.................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
..............................................................................GCTGACCCTACGATGCTGACCTGAGG............................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
....................................................................................................................................................................TAGGGATAGGGCACGCTAAATGGGTTT........................................................................................................................................................................ 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................................................................GAACTGAGCCACGAACACCTTCCCCGC............................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
............................................................................................................................................................................................................................................................................................................TAATCCCAGGGACTCGAGGAATTTGa................................. 26 a 1.00 0.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................TGACTTAGGGATAGGGCACGCTAAATGt............................................................................................................................................................................ 28 t 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.............GTCCCGTGTGGATGACGCCGTGG................................................................................................................................................................................................................................................................................................................................... 23 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
..........................................................................................................................................................................TAGGGCACGCTAAATGGGTTTAGGG.................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.......GGGCTTGTCCCGTGTGGATGACGCCGTG.................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
...............................................................................................................................................................................................................................................................................................................TCCCAGGGACTCGAGGAATTTGCT................................ 24 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................AGAAGCAGGAGGCGAGGgggt........................................................................................... 21 gggt 1.00 0.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.........................................AGGCACCCGGTGAGAAGG............................................................................................................................................................................................................................................................................................................ 18 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
.................................................................................................................................................................ACTTAGGGATAGGGCACGCTAAATGGGTa......................................................................................................................................................................... 29 a 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
...................................................TGAGAAGGCTAGCCTGGGGGCCAGAG.......................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - - - - - -
...............................................................................................................................................................TGACTTAGGGATAGGGCACGCTAAATG............................................................................................................................................................................. 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
...........................................................................................TGCTGACCTGAGGCAAAGTAGAGGaa.................................................................................................................................................................................................................................................. 26 aa 1.00 8.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - -
.................................................................TGGGGGCCAGAGAGCTGA.................................................................................................................................................................................................................................................................................... 18 2 0.50 0.50 - - - - - - - - - - - - - 0.50 - - - - - - - - - - - - - - -

Antisense strand
TGAATCTGGGCTTGTCCCGTGTGGATGACGCCGTGGCCGCCAGGCACCCGGTGAGAAGGCTAGCCTGGGGGCCAGAGAGCTGACCCTACGATGCTGACCTGAGGCAAAGTAGAGGCAGGGGAAGCCCTGTCAGGGAGTGGAGGAGTGGGGGAACCCTCCTGACTTAGGGATAGGGCACGCTAAATGGGTTTAGGGGAGGGTGGAATATATCCATTCTCCCTCGCCAAGGCCAGGTCGTGGCTAAAGGAGAAGCAGGAGGCGAGGAAAGAGAACTGAGCCACGAACACCTTCCCCGCCCCCTAATCCCAGGGACTCGAGGAATTTGCTGCCTGCCAGTCGCACGCCTTCATGAAGGGCGT
.....................................................................................................................................................................................................................((((((...((((.(((...))).))))....))))))..(((.((((.((((......................)))).)))).)))..........................................................
.................................................................................................................................................................................................................210................................................................................................309................................................
Size Perfect hit Total Norm Perfect Norm SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR363963(GSM822765)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT4()
Testes Data. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
mjTestesWT2()
Testes Data. (testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)
mjTestesWT3()
Testes Data. (testes)
SRR037901(GSM510437)
testes_rep2. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
..........................................................................................................................................................................................................................................................................................................CCTAATCCCAGGGACTCGAGGAA...................................... 23 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
...............................................................................................................................................................................................................................................AAAGGAGAAGCAGGAGctg..................................................................................................... 19 ctg 1.00 0.00 - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.00 -