| Gene: Man1b1 | ID: uc008irp.1_intron_8_0_chr2_25203747_f | SPECIES: mm9 |
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(2) OTHER.mut |
(6) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| TACGAATACCTGCTGAAACAGTGGATCCAGGGTGGCAAGAAGGAGACACAGTGAGGCCTGACCACTGTCTTGATGCAGGGCCCCCAGCTTCTGTCCCCACCCTTGGCTAGAAGCACTAGTCACGCAGGTGGTTTGGCTCCTCTACAGGAACTCAGCTCCCAGACGGCGGGGACCGTTCAGTCAACACGGCCTGCCTTGTAGCGGTGTTTGTGTTGGCAGTGCTCAGGGCCTGAGCTGACTTGGGCTGTGTGTGCACTATGTGCTTCCTGAGCAGGGCCAGGTCTGTAGAGCTTGTGTGTGGGTCAAGCTTAGTGAATGAAGCTCCTGGTCCTGTAGCTCTGAGGAAGACAGAACATGACAGAGCTCAGAGTAAGCTGATGTGTGCTCTTCACAGGTTGCTGGAAGACTATGTTAAAGCCATTGAGGGGATAAAAGCCCATCTGC ......................................................................................................................................................................................................................................................................................................((((.(((.((.(((((((...((.(((((...(((.(((...((((.......))))))).))).)))))))......))))).)).)))))..))))................................................... ......................................................................................................................................................................................................................................................................................................295................................................................................................394................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................TACAGGAACTCAGCTCCCAGACGGCGG................................................................................................................................................................................................................................................................................... | 27 | 1 | 11.00 | 11.00 | 3.00 | 3.00 | 1.00 | 3.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................TCTACAGGAACTCAGCTCCCAGACGGCG.................................................................................................................................................................................................................................................................................... | 28 | 1 | 5.00 | 5.00 | 3.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............GAAACAGTGGATCCAGGGTGGCAAGAAt.................................................................................................................................................................................................................................................................................................................................................................................................................. | 28 | t | 2.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................................................................................GAAGACTATGTTAAAGCCATTGAGGGG................ | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............AAACAGTGGATCCAGGGTGGCAAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........CTGCTGAAACAGTGGATCCAGGGTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................TCTGAGGAAGACAGAACATGACAGAG................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TACAGGAACTCAGCTCCCAGACGGCGGa.................................................................................................................................................................................................................................................................................. | 28 | a | 1.00 | 11.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............GAAACAGTGGATCCAGGGTGGCAAGAA................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................TGAGGAAGACAGAACATGACAGAGCTC.............................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................GAACATGACAGAGCTCAGAGTAAGCTa................................................................... | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................................................................................................................................................................................................TCCTGGTCCTGTAGCTCTGAGGAAGACAG............................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................................TGGAAGACTATGTTAAAGCCATTGAGGGGA............... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................TCACAGGTTGCTGGAAGACTATGTTAAAGC.......................... | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................GTCTGTAGAGCTTcag.................................................................................................................................................... | 16 | cag | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TACAGGAACTCAGCTCCCAGACGGCGGG.................................................................................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TTCAGTCAACACGGCCTGCCTTGTA.................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............AAACAGTGGATCCAGGGTGGCAAGAA................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TACCTGCTGAAACAGTGGATCCAGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................TGTTAAAGCCATTGAGGGGATAAAAG......... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................................................................................................................................................................TGTAGCTCTGAGGAAGACAGAACATG....................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................................................................TGTTAAAGCCATTGAGGGGATAAAAGC........ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................TACAGGAACTCAGCTCCCAGACGGCG.................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TGAAACAGTGGATCCAGGGTGGCAAGA.................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TGAAACAGTGGATCCAGGGTGGCAAGAA................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................................................................TCCTGTAGCTCTGAGGAAGACAGAACAT........................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................TGTAGCGGTGTTTGTGTTGGCAGTG............................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................GCGGTGTTTGTGTTGGtt.................................................................................................................................................................................................................................. | 18 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................TGTAGCGGTGTTTGTGTTGGCAGggc.............................................................................................................................................................................................................................. | 26 | ggc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................TGGCAAGAAGGAGACACAGTGAGGCCT................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................CTCCTGGTCCTGTAGCTC......................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| ..........................CCAGGGTGGCAAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................. | 16 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - |
| TACGAATACCTGCTGAAACAGTGGATCCAGGGTGGCAAGAAGGAGACACAGTGAGGCCTGACCACTGTCTTGATGCAGGGCCCCCAGCTTCTGTCCCCACCCTTGGCTAGAAGCACTAGTCACGCAGGTGGTTTGGCTCCTCTACAGGAACTCAGCTCCCAGACGGCGGGGACCGTTCAGTCAACACGGCCTGCCTTGTAGCGGTGTTTGTGTTGGCAGTGCTCAGGGCCTGAGCTGACTTGGGCTGTGTGTGCACTATGTGCTTCCTGAGCAGGGCCAGGTCTGTAGAGCTTGTGTGTGGGTCAAGCTTAGTGAATGAAGCTCCTGGTCCTGTAGCTCTGAGGAAGACAGAACATGACAGAGCTCAGAGTAAGCTGATGTGTGCTCTTCACAGGTTGCTGGAAGACTATGTTAAAGCCATTGAGGGGATAAAAGCCCATCTGC ......................................................................................................................................................................................................................................................................................................((((.(((.((.(((((((...((.(((((...(((.(((...((((.......))))))).))).)))))))......))))).)).)))))..))))................................................... ......................................................................................................................................................................................................................................................................................................295................................................................................................394................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................................................................................................................GAGCTGACTTGGGCTGTGTGTGCACTA.......................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |