| Gene: Grin1 | ID: uc008irh.1_intron_13_0_chr2_25160733_r | SPECIES: mm9 |
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(3) PIWI.ip |
(11) TESTES |
| CGTCGGGGAGCGCGAGATCTCTGGGAATGCCCTGCGCTACGCTCCTGACGGTGAGTGCTGGGCTGTGGGGTCGCCTGGGACTGTAGGCCAGTCCAGTCTCTAAGCTCCAGGGTCCCGCGCAGGCATCATCGGACTTCAGCTAATCAACGGCAAGAACGAGTCGGCCCACATC ......................................................((((.(((((.((((((.....(((((((..((....)))))))))...)))))).))))).)))).................................................... ..................................................51.....................................................................122................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................ATCATCGGACTTCAGCTAATCAACGGCAA................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| CGTCGGGGAGCGCGAGATCTCTGGGAATGCCCTGCGCTACGCTCCTGACGGTGAGTGCTGGGCTGTGGGGTCGCCTGGGACTGTAGGCCAGTCCAGTCTCTAAGCTCCAGGGTCCCGCGCAGGCATCATCGGACTTCAGCTAATCAACGGCAAGAACGAGTCGGCCCACATC ......................................................((((.(((((.((((((.....(((((((..((....)))))))))...)))))).))))).)))).................................................... ..................................................51.....................................................................122................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................GCCCTGCGCTACGCTCCTGACGGTGA...................................................................................................................... | 26 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - |
| .........GAGATCTCTGGGAATttgt................................................................................................................................................ | 19 | ttgt | 5.00 | 0.00 | - | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 |
| ............................GCCCTGCGCTACGCTCCTGACGGTG....................................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - |
| .......................................................................................................................CAGGCATCATCGGACTTCAGCTAATCA.......................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - |
| .....................TGGGAATGCCCTGCGCTACGCTCCTG............................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................TGCCCTGCGCTACGCTCCTGAC........................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................TAGGCCAGTCCAGTCTCT....................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |