| Gene: Arrdc1 | ID: uc008ipm.1_intron_5_0_chr2_24782697_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(1) PIWI.ip |
(9) TESTES |
| TACTAACTACATTTCCAGCCCCACACTTTCGTTTAAAACAAGCCCTTGTACGTAGCCTGTAGCTCCTGCTATGGTCATGCTGCTATAGTGCTGGAGACAGGTAGTGTGGACTGGTGGGCTGCACTGTTTACTTCTGGTCTGGCACTGTGGCCGCTATGGATTTCCTCTGGTTTGCTCCCACCTCCTTTTTGTCTCTGTAGGAAGTCTGCCGGCTGGAGAGCACAACTTCCCTTTTCAGTTCCTGCTTCCT ...........................................................................................................(((..((((((..(((...........((((..(((......))))))).((....)).......))).)))))))))................................................................. ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................AGACAGGTAGTGTGGACTGGTGGGCTGCACTGTTTACTTCTGGTCTGGCACT........................................................................................................ | 52 | 1 | 69.00 | 69.00 | 69.00 | - | - | - | - | - | - | - | - |
| .............................................................................TGCTGCTATAGTGCTGGAGACAGGTA................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................TTCTGGTCTGGCACTGTGGC................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ................................TTAAAACAAGCCCTTGTACGTAGCCT................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| .................................................................................................................................ACTTCTGGTCTGGCACTGTGGCCGCT............................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................TATGGTCATGCTGCTATAGTGCTGG............................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................................................................TTGTCTCTGTAGGAAGTCTGCCGGCTGt.................................. | 28 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................GCACTGTTTACTTCTGGTCTGGCACTGTGGC................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| TACTAACTACATTTCCAGCCCCACACTTTCGTTTAAAACAAGCCCTTGTACGTAGCCTGTAGCTCCTGCTATGGTCATGCTGCTATAGTGCTGGAGACAGGTAGTGTGGACTGGTGGGCTGCACTGTTTACTTCTGGTCTGGCACTGTGGCCGCTATGGATTTCCTCTGGTTTGCTCCCACCTCCTTTTTGTCTCTGTAGGAAGTCTGCCGGCTGGAGAGCACAACTTCCCTTTTCAGTTCCTGCTTCCT ...........................................................................................................(((..((((((..(((...........((((..(((......))))))).((....)).......))).)))))))))................................................................. ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| ...........CAGCCCCACACTTTaaac............................................................................................................................................................................................................................. | 18 | aaac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 |