(6)
OTHER.mut
(1)
OVARY
(2)
PIWI.ip
(3)
PIWI.mut
(19)
TESTES

Sense strand
TAAGAGTCCTAAAACGTTTTGGTCATGCATTTTCTATAACCCAAAAGGAAGACATGCTGTCACTTACTTCCCTCAGACTGCACTTAGATCAATAGGTTCTGGGTTCATCGCATGACAAACCTCTCTGTTTCTAAGTGGGTTGCAAACTTCTCAGCCTTGAAATTGAGAGAATGGCATTCCTTTCTCCCTGTTGTACACAGTGCTGCTGCAGAAGCAGATGCCATTGACCCGCTGATTAACATCCTGTCGA
................................................................................((((((((..((((((....(((((..((....))..))))).))))))))))))))((.(((....(((((((........)))))))....)))..))......................................................................
...............................................................................80....................................................................................................182..................................................................
Size Perfect hit Total Norm Perfect Norm SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
mjTestesWT4()
Testes Data. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
mjTestesWT3()
Testes Data. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM475281(GSM475281)
total RNA. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
....................................................................................TAGATCAATAGGTTCTGGGTTCATCGC........................................................................................................................................... 27 1 2.00 2.00 - - - - 1.00 1.00 - - - - - - - - - - - - - -
...............................TTCTATAACCCAAAAGGAAGACATGCT................................................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - -
............................................AAGGAAGACATGCTGTCACTTACTTCC................................................................................................................................................................................... 27 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - -
........................................................................................TCAATAGGTTCTGGGTTCATCGCATG........................................................................................................................................ 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - -
.............................TTTTCTATAACCCAAAAGGAAGACATGC................................................................................................................................................................................................. 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
............................................................................................TAGGTTCTGGGTTCATCGCATGACAAA................................................................................................................................... 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - -
......TCCTAAAACGTTTTGGTCATGCATTT.......................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - -
....................................................................................TAGATCAATAGGTTCTGGGTTCATC............................................................................................................................................. 25 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - -
..........................................................................................................................................................................................................CTGCTGCAGAAGCAGtgga............................. 19 tgga 1.00 0.00 - - - - - - - - - - - - - - - - - - 1.00 -
.........................................................................................................................................................................................CCCTGTTGTACACAGTGCTGCTGCAGA...................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - -
...............................................................TTACTTCCCTCAGACTGCACTTAGATC................................................................................................................................................................ 27 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - -
....................................TAACCCAAAAGGAAGACATGCTGTCACTTA........................................................................................................................................................................................ 30 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - -
..............................................................................TGCACTTAGATCAATAGGTTCTGGGTTC................................................................................................................................................ 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................................................TCAGCCTTGAAATTGAGAGAATGGCATT........................................................................ 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - -
...........................................................................................................TCGCATGACAAACCTCTCTGTTTCTAAGT.................................................................................................................. 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - -
.............................................................................CTGCACTTAGATCAATAGGTTCTG..................................................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00
............................................................................................TAGGTTCTGGGTTCATCGCATGACA..................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - -
...............................................................................................................................................................................................................................TTGACCCGCTGATTAACATCCTGTCG. 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................TGAAATTGAGAGAATGGCATTCCTTT................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - -
...........................................................................................................................TCTGTTTCTAAGTGGGTTGCAAACTT..................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - -
................................................................................................................................TTCTAAGTGGGTTGCAAACTTCTCAGCCT............................................................................................. 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................CACAGTGCTGCTGCAGAAGCAGATGCCAa.......................... 29 a 1.00 0.00 1.00 - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................TTGAAATTGAGAGAATGGCATTCCTTT................................................................... 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
................................................................TACTTCCCTCAGACTGCACTTAGATCA............................................................................................................................................................... 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - -
............................................................................................................................CTGTTTCTAAGTGGGTTGCAAACTTCT................................................................................................... 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
...................................................................................TTAGATCAATAGGTTCTGGGTTCATCGC........................................................................................................................................... 28 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - -
............................................................................................TAGGTTCTGGGTTCATCGCATGACAA.................................................................................................................................... 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - -
........................................................................................................................................................................................................TGCTGCTGCAGAAGatgt................................ 18 atgt 1.00 0.00 - - - - - - - - - - - - - - - - - 1.00 - -
....................................................................................TAGATCAATAGGTTCTGGGTTCATCGCA.......................................................................................................................................... 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
...................................................................................TTAGATCAATAGGTTCTGGGTTCATCG............................................................................................................................................ 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - -
........................................................................TCAGACTGCACTTAGATCAATAGGTTC....................................................................................................................................................... 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - -
...........................................................................................................................TCTGTTTCTAAGTGG................................................................................................................ 15 14 0.07 0.07 - - - - - - 0.07 - - - - - - - - - - - - -

Antisense strand
TAAGAGTCCTAAAACGTTTTGGTCATGCATTTTCTATAACCCAAAAGGAAGACATGCTGTCACTTACTTCCCTCAGACTGCACTTAGATCAATAGGTTCTGGGTTCATCGCATGACAAACCTCTCTGTTTCTAAGTGGGTTGCAAACTTCTCAGCCTTGAAATTGAGAGAATGGCATTCCTTTCTCCCTGTTGTACACAGTGCTGCTGCAGAAGCAGATGCCATTGACCCGCTGATTAACATCCTGTCGA
................................................................................((((((((..((((((....(((((..((....))..))))).))))))))))))))((.(((....(((((((........)))))))....)))..))......................................................................
...............................................................................80....................................................................................................182..................................................................
Size Perfect hit Total Norm Perfect Norm SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
mjTestesWT4()
Testes Data. (testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
mjTestesWT3()
Testes Data. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM475281(GSM475281)
total RNA. (testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
...........................................................................................................................................................................................................................GCCATTGACCCGCTGATTAACATCCTG.... 27 1 17.00 17.00 1.00 - - 14.00 - - - 1.00 - - 1.00 - - - - - - - - -
........................................................................................................................................................................................TCCCTGTTGTACACAGTGCTGCTGCA........................................ 26 1 11.00 11.00 2.00 6.00 - - 2.00 - - - - - 1.00 - - - - - - - - -
....................................................................TCCCTCAGACTGCACTTAGATCAATA............................................................................................................................................................ 26 1 8.00 8.00 2.00 - - - - 1.00 - - - 1.00 - 1.00 3.00 - - - - - - -
...........................................................................................................................................................................................................................GCCATTGACCCGCTGATTAACATCCTGT... 28 1 7.00 7.00 - - - - - - - - 7.00 - - - - - - - - - - -
.................................................................ACTTCCCTCAGACTGCACTTAGATCAAT............................................................................................................................................................. 28 1 5.00 5.00 - 1.00 - - - - - 2.00 - - - - - - 2.00 - - - - -
............................................................................ACTGCACTTAGATCAATAGGTTCTGGGTTCA............................................................................................................................................... 31 1 4.00 4.00 - - - 4.00 - - - - - - - - - - - - - - - -
............................................................................................................CGCATGACAAACCTCTCTGTTTCTAA.................................................................................................................... 26 1 3.00 3.00 - 1.00 1.00 - 1.00 - - - - - - - - - - - - - - -
.................................................................CCCTCAGACTGCACTTAGATCAATAcagt............................................................................................................................................................ 29 cagt 2.00 0.00 - - 1.00 - 1.00 - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................TGACCCGCTGATTAACATCCTGTCGA 26 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - -
...................................................................TTCCCTCAGACTGCACTTAGATCAATA............................................................................................................................................................ 27 1 2.00 2.00 - - 1.00 - - - - - - - - - - 1.00 - - - - - -
.................................................................ACTTCCCTCAGACTGCACTTAGATCA............................................................................................................................................................... 26 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - -
......................................................................................................................................GTGGGTTGCAAACTTCTCAGCCTTGAAA........................................................................................ 28 1 2.00 2.00 - 1.00 - - - - - 1.00 - - - - - - - - - - - -
..................................................................CTTCCCTCAGACTGCACTTAGATCAATA............................................................................................................................................................ 28 1 2.00 2.00 1.00 - - - - - - 1.00 - - - - - - - - - - - -
.................................................................ACTTCCCTCAGACTGCACTTAGATCAATA............................................................................................................................................................ 29 1 2.00 2.00 - - - - - - - - - - - - - - - 2.00 - - - -
..........................................................................AGACTGCACTTAGATCAATAGGTTCTGG.................................................................................................................................................... 28 1 2.00 2.00 - - 1.00 - 1.00 - - - - - - - - - - - - - - -
............................................................CACTTACTTCCCTCAGACTGCACTTAG................................................................................................................................................................... 27 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................GCATTCCTTTCTCCCTGTTGTACACA................................................... 26 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - - - -
............................................................................ACTGCACTTAGATCAATA............................................................................................................................................................ 18 1 2.00 2.00 - - - - - - - - - - 1.00 1.00 - - - - - - - -
....................................................................TCCCTCAGACTGCACTTAGAT................................................................................................................................................................. 21 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - - - -
.....................................................................CCCTCAGACTGCACTTAGATCAATA............................................................................................................................................................ 25 1 2.00 2.00 1.00 - - - 1.00 - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................GATGCCATTGACCCGCTGATTAACAT........ 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - -
.................................................................ACTTCCCTCAGACTGCACTTA.................................................................................................................................................................... 21 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
................TTTTGGTCATGCATTTTCTATAACCCA............................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - -
..............................................................................................................................................................................................................................ATTGACCCGCTGATTAACATCCTGTCGA 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................CTCCCTGTTGTACACAGTGCTGCTGCAt........................................ 28 t 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - -
.........................................................................................................................................GGTTGCAAACTTCTCAGCCTTGAAATTGA.................................................................................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
.....................................AACCCAAAAGGAAGACATGCTGTCACTTA........................................................................................................................................................................................ 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
..........................................................CTTACTTCCCTCAGACTGCAagac........................................................................................................................................................................ 24 agac 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - - - -
......................................................................CCTCAGACTGCACTTAGATCAATA............................................................................................................................................................ 24 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 - - -
.......................CATGCATTTTCTATAACCCAAAAGGA......................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - -
.......CCTAAAACGTTTTGGTCATGCATTTTCTA...................................................................................................................................................................................................................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
.........................................................................................................................................................................................CCCTGTTGTACACAGTGCTGCTGCAGA...................................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - -
...............................................GAAGACATGCTGTCACTTACTTCCCTCA............................................................................................................................................................................... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - -
.............................................................ACTTACTTCCCTCAGACTGCACTTAGA.................................................................................................................................................................. 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - -
......................................................................CCTCAGACTGCACTTAGATCAATAGGTTC....................................................................................................................................................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
..............................................................................................................CATGACAAACCTCTCTGTTTCTAAGTGG................................................................................................................ 28 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - -
.................................................................CTTCCCTCAGACTGCACTTAGATCAATAa............................................................................................................................................................ 29 a 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - -
.....................................................................................AGATCAATAGGTTCTGGGTTCATCGCATGACA..................................................................................................................................... 32 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - -
...............................................AAGACATGCTGTCACTTACTTCCCTCAGAa............................................................................................................................................................................. 30 a 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - -
..........................GCATTTTCTATAACCCAAAAGGAAGACA.................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - -
........................................................................................................................................................................GAATGGCATTCCTTTCTCCCTGTTGTA....................................................... 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - -
...................................................................................TTAGATCAATAGGTTCTGGGTTCATCGCA.......................................................................................................................................... 29 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
.....................................................................................AGATCAATAGGTTCTGGGTTCATCGCA.......................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - 1.00 - - - - - - -
............................................................................................................................................TGCAAACTTCTCAGCCTTGAAATTGA.................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - -
...................................................................................................................................................TTCTCAGCCTTGAAATTGAGAGAATGGCA.......................................................................... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - -
.................................................................CTTCCCTCAGACTGCACTTAGATCAATa............................................................................................................................................................. 28 a 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - -
...........AAACGTTTTGGTCATGCATTTTCTA...................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - -
.............ACGTTTTGGTCATGCATTTTCTA...................................................................................................................................................................................................................... 23 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - -
..........AAAACGTTTTGGTCATGCATTTTCTATA.................................................................................................................................................................................................................... 28 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - -
....................................................................CCCTCAGACTGCACTTAGATCAATAt............................................................................................................................................................ 26 t 1.00 0.00 - - 1.00 - - - - - - - - - - - - - - - - -
...........AAACGTTTTGGTCATGCATTTTCTATAACCCA............................................................................................................................................................................................................... 32 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - -
.......................CATGCATTTTCTATAACCCAAA............................................................................................................................................................................................................. 22 1 1.00 1.00 - - - - - - - - - - - - - 1.00 - - - - - -
.............................................................................................................................................................................................................................CATTGACCCGCTGATTAACATCCTGTCGA 29 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - -
......................................................................................................................................................................................................................CAGATGCCATTGACCCGCTGATTAACA......... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - -
................................................AAGACATGCTGTCACTTACTTCCCTCAGA............................................................................................................................................................................. 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - -
......................................................................................................................................TGGGTTGCAAACTTCTCAGCCTTGAa.......................................................................................... 26 a 1.00 0.00 - - - - - - 1.00 - - - - - - - - - - - - -
.......................................................................................................................................................................................CTCCCTGTTGTACACAGTGCTGCTGCA........................................ 27 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - -
..........................................................................................AATAGGTTCTGGGTTCATCGCATGACA..................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - - - -
.......................................................................................................................................................................................................................AGATGCCATTGACCCGCTGATTAACA......... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................AGTGGGTTGCAAACTTCTCAGCCTTGAAA........................................................................................ 29 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - -
............................................................................................................CGCATGACAAACCTCTCTGTTTCTA..................................................................................................................... 25 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - -