| Gene: Upf2 | ID: uc008igc.1_intron_4_0_chr2_5897149_f.5p | SPECIES: mm9 |
|
|
(2) OTHER.mut |
(5) TESTES |
| AGACAATGAAAAAAGTCAGAACAAAGATTCTAACAAAGATGATTCCAAAGGTAAATTATTTTTTAAAGTAATATTATTTATATATGTATGCATCTATCTATCTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTGTGTGCCAGGGGGTAGTACATGCAAGTCAGAGGACAACTTGACAGAGTCAGATTTCTTTTTCTACCTTTATTTG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM475281(GSM475281) total RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|
| .......................................................................TATTATTTATATATGTATGCATCTATCTATCTCTATCTATCTATCTATCTAT............................................................................................................................... | 52 | 1 | 41.00 | 41.00 | 41.00 | - | - | - | - |
| .....................................................................................................................................................................................................GCAAGTCAGAGGACAACTTGACAG............................. | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - |
| .....................................................................................................................................................................................................GCAAGTCAGAGGACAACTT.................................. | 19 | 11 | 0.18 | 0.18 | - | - | 0.09 | - | 0.09 |
| ....................................................................................................................................................................................................TGCAAGTCAGAGGACAACTT.................................. | 20 | 10 | 0.10 | 0.10 | - | - | - | - | 0.10 |
| AGACAATGAAAAAAGTCAGAACAAAGATTCTAACAAAGATGATTCCAAAGGTAAATTATTTTTTAAAGTAATATTATTTATATATGTATGCATCTATCTATCTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTGTGTGCCAGGGGGTAGTACATGCAAGTCAGAGGACAACTTGACAGAGTCAGATTTCTTTTTCTACCTTTATTTG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM475281(GSM475281) total RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................TGCAAGTCAGAGGACAACTTGAcgt................................ | 25 | cgt | 4.00 | 0.00 | - | 4.00 | - | - | - |
| .................................................................................................................................................................................................TGCAAGTCAGAGGACAACTTGctt................................. | 24 | ctt | 1.00 | 0.00 | - | 1.00 | - | - | - |
| ...................................................................................................................................................................................................TGCAAGTCAGAGGACAACTTGAc................................ | 23 | c | 1.00 | 0.00 | - | - | 1.00 | - | - |
| .................................................................................................................................................................................................GCAAGTCAGAGGACAACTTccgt.................................. | 23 | ccgt | 1.00 | 0.18 | - | 1.00 | - | - | - |
| .............................................................................................................................................................................................ACATGCAAGTCAGAGGACAgtgt...................................... | 23 | gtgt | 1.00 | 0.00 | - | 1.00 | - | - | - |
| ...................................................................................................................................................................................................GCAAGTCAGAGGACAACTTGAgt................................ | 23 | gt | 1.00 | 0.00 | - | 1.00 | - | - | - |