| Gene: Dhtkd1 | ID: uc008iga.1_intron_15_0_chr2_5853589_r.5p | SPECIES: mm9 |
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(5) OTHER.mut |
(4) PIWI.ip |
(2) PIWI.mut |
(18) TESTES |
| TAGGAAAGCCAAGAGCGGAGAGCCTCGAGGCGACCGTGCACGCCCCTCAGGTTGGGGATGCAGCGGGCAGAGGGCAAGGACCAGAGGGGGCTCCTGTGCAGCTTGTGGTGGCTCCGGGGAGCTTCTGGCCTGTGAGGAATCTGGCCTTGGAGAGCAGAGGAGACAGACGGAGGGAAGCTTGGGAATTGTCAGTGTCGAGGTCTCACCAGTGTCTAACCTTCACAGTTAGACATCCCTGGCTTTGTTTCCA ...................................................((((((..((.((((((.....(((((((((......)).)))).))).)))))).))..))))))....((((((..((.(((((.......))))).))..)))))).......................................................................................... ..................................................51.............................................................................................................162...................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................TCAGGTTGGGGATGCAGCGGGCAGA................................................................................................................................................................................... | 25 | 1 | 7.00 | 7.00 | 6.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TGAGGAATCTGGCCTTGGAGAGCAGA............................................................................................ | 26 | 1 | 4.00 | 4.00 | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................................................................TGTGAGGAATCTGGCCTTGGAGAGC............................................................................................... | 25 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................TTGTCAGTGTCGAGGTCTCACCAGT........................................ | 25 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................TCAGGTTGGGGATGCAGCGGGCAG.................................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TGCAGCGGGCAGAGGGCAAGGACCAG...................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................TGCAGCTTGTGGTGGCTCCGGGGgg................................................................................................................................. | 25 | gg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................................................................................GGGAAGCTTGGGAATTGTC............................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................TGTGAGGAATCTGGCCTTGGAG.................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................CAAGGACCAGAGGGGGCTCCTGT......................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................TGTGCAGCTTGTGGTGGCTCCGGGG................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................TGGGGATGCAGCGGGCAGAGGGCAA............................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TGCAGCGGGCAGAGGGCAAGGAC......................................................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TGCAGCGGGCAGAGGGCAAGGA.......................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TGCAGCGGGCAGAGGGCAAGGACCAGA..................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................CTCCGGGGAGCTTCTGGCCTGTGAGGAATCTGGCC........................................................................................................ | 35 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................AGGAATCTGGCCTTGGAGAGCAGAG........................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGGCCTTGGAGAGCAGAGGAGACAG.................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................TCAGGTTGGGGATGCAGCGGGCAGAGG................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................................................................................................................GGAATCTGGCCTTGGAGAGCAGAGG.......................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................ATTGTCAGTGTCGAGGTCTCACC........................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................GTGAGGAATCTGGCCTTGGAGAGCAGA............................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGGCCTTGGAGAGCAGAGGAGACAGAC.................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TGAGGAATCTGGCCTTGGAGAGCAGAG........................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................TGGCCTGTGAGGAATCTGGCCTTGGAGA................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................GGGATGCAGCGGGCAGAG.................................................................................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - |
| ......................................................................AGGGCAAGGACCAGAGGG.................................................................................................................................................................. | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - |
| TAGGAAAGCCAAGAGCGGAGAGCCTCGAGGCGACCGTGCACGCCCCTCAGGTTGGGGATGCAGCGGGCAGAGGGCAAGGACCAGAGGGGGCTCCTGTGCAGCTTGTGGTGGCTCCGGGGAGCTTCTGGCCTGTGAGGAATCTGGCCTTGGAGAGCAGAGGAGACAGACGGAGGGAAGCTTGGGAATTGTCAGTGTCGAGGTCTCACCAGTGTCTAACCTTCACAGTTAGACATCCCTGGCTTTGTTTCCA ...................................................((((((..((.((((((.....(((((((((......)).)))).))).)))))).))..))))))....((((((..((.(((((.......))))).))..)))))).......................................................................................... ..................................................51.............................................................................................................162...................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT3() Testes Data. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................GCTTGGGAATTGTCAGTGTCGAGGTCTCA............................................. | 29 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................GAGGTCTCACCAGTGTCT.................................... | 18 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |