| Gene: Hspa14 | ID: uc008iei.1_intron_1_0_chr2_3426293_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(4) PIWI.ip |
(16) TESTES |
| TGCGCTTAGCCCTTGTAGAAGAGCGAGTCCTTTTGTTATCAAGCCATTAAACCCACAGTCCATCACTTCCTATGGGCGGATGAACTCCCAAAGTCTTGACCATATGCTGCGGAATCTGCACACAGGTAGCACGGCTTCTCTTGCTGCCAGGATGATCCTCACACCTGCCCTGTAACTCTCGTTCCCCTGTGGCCTTCCAGCCAGAAGTGTGGTCCTCAGACCTGCCTTCTCAGCAGAGTGCCCTGGGAGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................TGCTGCGGAATCTGCACACAGGTAGC........................................................................................................................ | 26 | 1 | 4.00 | 4.00 | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................TATGCTGCGGAATCTGCACACAGGTAG......................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................TTCTCTTGCTGCCAGGATGATCCTCAC........................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................CCAGGATGATCCTCAgtgg..................................................................................... | 19 | gtgg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................................................TGCTGCGGAATCTGCACACAGGTAGCAC...................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................TCTGCACACAGGTAGCACGGCTTCTCTTGCTGCCAGG................................................................................................... | 37 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................TGCTGCCAGGATGATCCTCACACCT.................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................TCTTGCTGCCAGGATGATCCTCAC........................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................................................................................................................................................TGTAACTCTCGTTCCCCTGTGGCCTTC..................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................CCTGTAACTCTCGTTCCCCTGTGGCCT....................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TGCGGAATCTGCACACAGGTAGCACGGC................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................TAACTCTCGTTCCCCTGTGGCCTTCC.................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ............TTGTAGAAGAGCGAGTCCTTTTGTTA.................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................AGTCTTGACCATATGCTGCGGAATCTGCACA................................................................................................................................ | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................TGCGGAATCTGCACACAGGTAGCA....................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TGCGGAATCTGCACACAGGTAGCACG..................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TCCAGCCAGAAGTGTGGTCCTCAGACCT........................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................GCGGAATCTGCACACAGGTAGCACGGCTTCTC.............................................................................................................. | 32 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................TATGCTGCGGAATCTGCACACAGG............................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................TATGCTGCGGAATCTGCACACAGGTAGC........................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGCGCTTAGCCCTTGTAGAAGAGCGAGTCCTTTTGTTATCAAGCCATTAAACCCACAGTCCATCACTTCCTATGGGCGGATGAACTCCCAAAGTCTTGACCATATGCTGCGGAATCTGCACACAGGTAGCACGGCTTCTCTTGCTGCCAGGATGATCCTCACACCTGCCCTGTAACTCTCGTTCCCCTGTGGCCTTCCAGCCAGAAGTGTGGTCCTCAGACCTGCCTTCTCAGCAGAGTGCCCTGGGAGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................CTTCTCTTGCTGCCAGGATGATCCTCA......................................................................................... | 27 | 1 | 7.00 | 7.00 | 7.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................AAACCCACAGTCCATCACTTCCTA.................................................................................................................................................................................. | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................................................................AAGTGTGGTCCTCAGACCTGCCTTCTCA.................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |