| Gene: Csf2ra | ID: uc008icj.1_intron_3_0_chr19_61301556_r | SPECIES: mm9 |
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(5) OTHER.mut |
(1) PIWI.ip |
(14) TESTES |
| CGCCCCCATCCCTCCCGCAGAGCGCAGAGCCAGGAAGCACACCCCGGAAGGTGACCTGAGCTGATGCAGGGGCATGACCTGGATGGCGGGGATGGAGAGGACCTGAGGCAGGGGGATGGGCTTGGGTGTGGGTGGGCGTAGTCGCGGACTCACTGGGACAGGTTTCGTACTTCCGGCCCCACCCCCCAGGTGCTCGTCGTGGAGGAGACCCGCCTCGCCTTCCCCAGCCCCGCCCCCCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................................................................................TGCTCGTCGTGGAGGAGACCCGCCTC....................... | 26 | 1 | 8.00 | 8.00 | 5.00 | - | 1.00 | - | - | - | - | - | 2.00 | - | - | - | - | - |
| .......................................................................................GGGGATGGAGAGGACCTGAGGCAGG............................................................................................................................... | 25 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | 4.00 | - | - | - | - | - | - | - |
| ........TCCCTCCCGCAGAGCGCAGAGCCAGG............................................................................................................................................................................................................. | 26 | 1 | 3.00 | 3.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................AAGCACACCCCGGAAGGTGACCTGAGC.................................................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - |
| ............................................................................................TGGAGAGGACCTGAGGCAGGGGGATGG........................................................................................................................ | 27 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................CGTAGTCGCGGACTCACTGGGACAGG............................................................................. | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TAGTCGCGGACTCACTGGGA................................................................................. | 20 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TAGTCGCGGACTCACTGGGACAGGT............................................................................ | 25 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................TGAGCTGATGCAGGGGCATGACCTGGAT........................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................TGATGCAGGGGCATGACCTGGATGG......................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................GGCGTAGTCGCGGACTCACTGGGACAGGTT........................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGGGACAGGTTTCGTACTTCCGGCCC............................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................TGCTCGTCGTGGAGGAGACCCGCCTCGCCT................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................................................................TCGTCGTGGAGGAGACCCGCCTCGCCTT.................. | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................CGGAAGGTGACCTGAGCTGATGCAGGG........................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................TGGATGGCGGGGATGGAGAGGACCTGA..................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TCCCTCCCGCAGAGCGCAGAGCCAG.............................................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..............................................................................................................................................................................................TGCTCGTCGTGGAGGAGAC.............................. | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................TGGGACAGGTTTCGTACTTCCGGCC............................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................AGGGGCATGACCTGGATGG......................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................GGGGCATGACCTGGATGGCGGGGA................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TAGTCGCGGACTCACTGGGACAGGTTT.......................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................TGCAGGGGCATGACCTGGATGGCGGGt.................................................................................................................................................... | 27 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TGACCTGGATGGCGGGGATGGAGAGG........................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................GTGCTCGTCGTGGAGGAGA............................... | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................AGCACACCCCGGAAGGTGACCTGAGCTGATG............................................................................................................................................................................. | 31 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................ATGGAGAGGACCTGAG.................................................................................................................................... | 16 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |
| CGCCCCCATCCCTCCCGCAGAGCGCAGAGCCAGGAAGCACACCCCGGAAGGTGACCTGAGCTGATGCAGGGGCATGACCTGGATGGCGGGGATGGAGAGGACCTGAGGCAGGGGGATGGGCTTGGGTGTGGGTGGGCGTAGTCGCGGACTCACTGGGACAGGTTTCGTACTTCCGGCCCCACCCCCCAGGTGCTCGTCGTGGAGGAGACCCGCCTCGCCTTCCCCAGCCCCGCCCCCCA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................GGTGGGCGTAGTCGCGGACTCACTGGGA................................................................................. | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCCCCCATCCCTCCCGCAGAGCGCAa..................................................................................................................................................................................................................... | 26 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................GGTGCTCGTCGTGGAGGAGACCCGcgg........................... | 27 | cgg | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ............TCCCGCAGAGCGCAGAGCCAGGA............................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....CCATCCCTCCCGCAGAGCGCA..................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................GCAGGGGCATGACCTGGATGGCGGGGA................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CACCCCCCAGGTGCTCGTCGTGGAGGA................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................GCGCAGAGCCAGGAAGCACACCCCGGA............................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TTCGTACTTCCGGCCCCA.......................................................... | 18 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |