| Gene: 1700011F14Rik | ID: uc008iao.1_intron_7_0_chr19_58626006_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(2) PIWI.ip |
(8) TESTES |
| GTGTGTCCACATCAGAGTGTGCTGTCCCTTACAGATGTGTGTGCACATCAGAGTGTGCTGTCCCTTACAGATGTGTGCACATCAGAGTGCACTGTCCCTTTCAGATGTGTATGCACATCAGAGTGTGCTGTCCCTTATAGATGTTTGCACATCAGAGTATGCTGTCCCTTACAGATGTGTTCTGCATGTTTACTTTTTAGGCACTGGCACCAAAGGATCCCCAGGACAGTAACTCCTTGAGTCATGAGCC ......................................................................................................(((((((((.(((((((...((((((.(((.......)))....))))))(((......))).........)))))))..)))))))))........................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................ATCAGAGTGCACTGTCCCTTTCAGATGTGTATGCACATCAGAGTGTGCTGTC...................................................................................................................... | 52 | 1 | 91.00 | 91.00 | 91.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................CCCAGGACAGTAACTCCTTGAGTCATG.... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................................................................................................................TGGCACCAAAGGATCCCCAGGACAGTAA.................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................................................................................................GGCACCAAAGGATCCCCAGGACAGTAACTC............... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................................................................TGGCACCAAAGGATCCCCAGGACAGT.................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - |
| ............................................................................................................................................................................................................TGGCACCAAAGGATCCC............................. | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 |
| GTGTGTCCACATCAGAGTGTGCTGTCCCTTACAGATGTGTGTGCACATCAGAGTGTGCTGTCCCTTACAGATGTGTGCACATCAGAGTGCACTGTCCCTTTCAGATGTGTATGCACATCAGAGTGTGCTGTCCCTTATAGATGTTTGCACATCAGAGTATGCTGTCCCTTACAGATGTGTTCTGCATGTTTACTTTTTAGGCACTGGCACCAAAGGATCCCCAGGACAGTAACTCCTTGAGTCATGAGCC ......................................................................................................(((((((((.(((((((...((((((.(((.......)))....))))))(((......))).........)))))))..)))))))))........................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................GTATGCTGTCCCTTcagt................................................................................ | 18 | cagt | 2.00 | 0.00 | - | 1.00 | 1.00 | - | - | - | - | - |
| ........................................................................................................................................................GTATGCTGTCCCTTcatt................................................................................ | 18 | catt | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - |
| ........................................................................................................................................................GTATGCTGTCCCTTccga................................................................................ | 18 | ccga | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - |