| Gene: Xpnpep1 | ID: uc008hwf.1_intron_17_0_chr19_53086772_r.5p | SPECIES: mm9 |
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(1) OTHER.ip |
(2) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(1) TDRD1.ip |
(24) TESTES |
| CCTCCAGGCTGCCAAACAGATGGACAACAACTGGACTCTCATGAAGATGGGTGGGTAGAAGATGGGTGGGTAGAAGCAGGGGCCAGCCCCCCTGGCAGAACTTACATGGTCTGGGCAGGGCTGGTAGAATGCTTTGGGGACCCAGGATCTTAGTGCTTCTCCTGACATCTTGGATCCTTTGAAAAGCCAAGGAAAAACAAAAAACCACTATGCTGTTTTGTACACACCAATGTATACTCACTTTTAGAAG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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| ..................................................GTGGGTAGAAGATGGGTGGGTAGAAGCAGGGGCCAGCCCCCCTGGCAGAACT.................................................................................................................................................... | 52 | 1 | 117.00 | 117.00 | 117.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TGGACAACAACTGGACTCTCATGAAGATG......................................................................................................................................................................................................... | 29 | 1 | 18.00 | 18.00 | - | 8.00 | 4.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | 1.00 | 1.00 |
| ....................TGGACAACAACTGGACTCTCATGAAGATGt........................................................................................................................................................................................................ | 30 | t | 17.00 | 18.00 | - | 3.00 | 5.00 | 6.00 | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................GACAACAACTGGACTCTCATGAAGATG......................................................................................................................................................................................................... | 27 | 1 | 10.00 | 10.00 | - | - | - | - | 4.00 | - | 1.00 | 1.00 | - | 1.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................ACAACAACTGGACTCTCATGAAGATG......................................................................................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | - | - | - | - | - | - | 1.00 | 1.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................ACAACAACTGGACTCTCATGAAGATGG........................................................................................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................ACAACTGGACTCTCATGAAGATGG........................................................................................................................................................................................................ | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| .........TGCCAAACAGATGGACAACAACTGGACTC.................................................................................................................................................................................................................... | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TGGACAACAACTGGACTCTCATGAAGAT.......................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................ACAACTGGACTCTCATGA.............................................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................GACAACAACTGGACTCTCATGAAGATGGGT...................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TGGACAACAACTGGACTCTCATGAAGATGa........................................................................................................................................................................................................ | 30 | a | 1.00 | 18.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................TGGACAACAACTGGACTCTCATGAAG............................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................ACAACAACTGGACTCTCATGAAGATGGGT...................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................AACAACTGGACTCTCATGAAGATGGG....................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............ACAGATGGACAACAACT.......................................................................................................................................................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - |
| CCTCCAGGCTGCCAAACAGATGGACAACAACTGGACTCTCATGAAGATGGGTGGGTAGAAGATGGGTGGGTAGAAGCAGGGGCCAGCCCCCCTGGCAGAACTTACATGGTCTGGGCAGGGCTGGTAGAATGCTTTGGGGACCCAGGATCTTAGTGCTTCTCCTGACATCTTGGATCCTTTGAAAAGCCAAGGAAAAACAAAAAACCACTATGCTGTTTTGTACACACCAATGTATACTCACTTTTAGAAG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR363957(GSM822759) P20-WTSmall RNA Miwi IPread_length: 36. (testes) | SRR363958(GSM822760) Adult-WTSmall RNA Miwi IP. (testes) | SRR028731(GSM400968) Mili-wt-associated. (testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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