| Gene: Sh3pxd2a | ID: uc008huy.1_intron_3_0_chr19_47348009_r.3p | SPECIES: mm9 |
|
|
|
(2) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(9) TESTES |
| TCTGAGAGCAGTCGCTCTGTTTCCAGCATCTGACCCCCCCCAGCTCTGGTTTCCTCGGCAACAACAGACCGGCCAAACCTCTAGCAGAGCCTTCCAGAGAAGGCTCGGCTAGGCGGGCTCAGATGGAGACAGACCTGGGAGTAGAAGGGGGAAACCAGAAATGAGGGCTTTAATGATGGTGTGTCCCCTTCCTCTCACAGGTACCTCGGCAAAGAGGGTTGGGCACCAGCGTCCTACCTGAAGAAGGCCA ......................................................................................................................................(((.(((..((((((((..((((...((..........))..))))...))))))))..))).))).................................................. ...................................................................................................................................132.................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037903(GSM510439) testes_rep4. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................................................................CACCAGCGTCCTACCTGAAGAAGGCCA | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | 1.00 | - | - |
| ..................................................................................................................................................................................GTGTGTCCCCTTCCTCTCACA................................................... | 21 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................GGGAGTAGAAGGGGGAAACCAGAA.......................................................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................CTGGGAGTAGAAGGGGGAAtaaa............................................................................................. | 23 | taaa | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................GAAATGAGGGCTTTAATGATGGTGT.................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................................CCTGGGAGTAGAAGGGGGAAACC.............................................................................................. | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................GTGTGTCCCCTTCCTCTCACAG.................................................. | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................CGGCCAAACCTCTAGCAGAGC................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................TGGGAGTAGAAGGGGGAAAC............................................................................................... | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................AGAAATGAGGGCTTTAATGATGGTG..................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................CCTCGGCAAAGAGGGTTGGG........................... | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................GAAATGAGGGCTTTAATGATG........................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| ......................................................................................................................................CTGGGAGTAGAAGGGGGAAACCAt............................................................................................ | 24 | t | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................................................................................................................CTGGGAGTAGAAGGGGGAAACCA............................................................................................. | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| TCTGAGAGCAGTCGCTCTGTTTCCAGCATCTGACCCCCCCCAGCTCTGGTTTCCTCGGCAACAACAGACCGGCCAAACCTCTAGCAGAGCCTTCCAGAGAAGGCTCGGCTAGGCGGGCTCAGATGGAGACAGACCTGGGAGTAGAAGGGGGAAACCAGAAATGAGGGCTTTAATGATGGTGTGTCCCCTTCCTCTCACAGGTACCTCGGCAAAGAGGGTTGGGCACCAGCGTCCTACCTGAAGAAGGCCA ......................................................................................................................................(((.(((..((((((((..((((...((..........))..))))...))))))))..))).))).................................................. ...................................................................................................................................132.................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037903(GSM510439) testes_rep4. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................CGGCCAAACCTCTActct....................................................................................................................................................................... | 18 | ctct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 |