| Gene: Kazald1 | ID: uc008hqt.1_intron_0_0_chr19_45150727_f | SPECIES: mm9 |
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(4) OTHER.mut |
(4) PIWI.ip |
(1) PIWI.mut |
(19) TESTES |
| TTTTTTAGGTTGGAAATCCCAGCTGTTAAGGGCCTAGTCCAAGGCACTAGGTGAGTCGCTGGTATGTCCCCAGCACCATCACCCCAACCTGAAGTTTTTACATCAAGTGTAGTTTTATCTATCTCTGGGGCAAAGATGCATCAGAGTTGGGTGGTTTCTGGAGGTGATGCTGGTGTGTGTGTGCGCGCGCGCGTGCATATATGTATGCATGTGTGTGTGTGTATACGCGTATGTCTGTGTATGGGTGTGTGCATCCCTGCATGGGTGTTAGTGATCATTCCCCGATACACTCTCTCTTTATTCCCTAGTCCCCAAGACCAGCTTAATCAATTACCAACTGGCATAAACCCCTGGGAATCACCAGGCTTCTTTGTTAGGGCTTCTAGTTGGCTACAGGGTAGCAGAGGATAGAATCAAGCTTTTATACAGCCTTGACTTTATCTCTGACCTCCAGACCTGGCTTCCCTCTCCTGGCAGGGTGCCACCTACGCGCCGATGCCCCGAGTGTTCACAGGGCTTCCAGCTAA ..........................................................................................................................................................................................................................................................................................................................................................................................(((...((..((...((((....((((.((((((.(((((((.......))).)))).)))))))))).........))))....))..))...))).................................................... .........................................................................................................................................................................................................................................................................................................................................................................................378................................................................................................477................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTTATCTCTGACCTCCAGACCTGGCT................................................................. | 30 | 1 | 5.00 | 5.00 | 1.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTTATCTCTGACCTCCAGACCTGGC.................................................................. | 29 | 1 | 2.00 | 2.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTTATCTCTGACCTCCAGt........................................................................ | 23 | t | 2.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................TATCTATCTCTGGGGCAAAGATGCATC................................................................................................................................................................................................................................................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................TGTGTGTGTGCGCGCGCGCGTGggta........................................................................................................................................................................................................................................................................................................................................ | 26 | ggta | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................TAGTTGGCTACAGGGTAGCAGAGGATA..................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..TTTTAGGTTGGAAATCCCAaggc...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 23 | aggc | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................TAGTTGGCTACAGGGTAGCAGAGGATt..................................................................................................................... | 27 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TGTAGTTTTATCTATCTCTGGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................TAGGGCTTCTAGTTGGCTACAGGGTA............................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................TCCCTGCATGGGTGTTAGTGATCA.......................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................TGGAGGTGATGCTGGTGTGTGTGTG........................................................................................................................................................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTTATCTCTGACCTCCAGAC....................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................................................................................................................................GGCTACAGGGTAGCAGAGGATAGAAT................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................TATACAGCCTTGACTTTATCTCTGACC.............................................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................TGTTAGGGCTTCTAGTTGGCTACAGG.................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................GGTAGCAGAGGATAGAATCAAGCTT.......................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................TAGGGCTTCTAGTTGGCTACAGGGTAa.............................................................................................................................. | 27 | a | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................TCAGAGTTGGGTGGTTTCTGGAGGT.......................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCTGGCAGGGTGCCACCTACGCGC.................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............................................................................................................................................................TCTGGAGGTGATGCTGGTGTGTGT........................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TTTTTTAGGTTGGAAATCCCAGCTGTTAAGGGCCTAGTCCAAGGCACTAGGTGAGTCGCTGGTATGTCCCCAGCACCATCACCCCAACCTGAAGTTTTTACATCAAGTGTAGTTTTATCTATCTCTGGGGCAAAGATGCATCAGAGTTGGGTGGTTTCTGGAGGTGATGCTGGTGTGTGTGTGCGCGCGCGCGTGCATATATGTATGCATGTGTGTGTGTGTATACGCGTATGTCTGTGTATGGGTGTGTGCATCCCTGCATGGGTGTTAGTGATCATTCCCCGATACACTCTCTCTTTATTCCCTAGTCCCCAAGACCAGCTTAATCAATTACCAACTGGCATAAACCCCTGGGAATCACCAGGCTTCTTTGTTAGGGCTTCTAGTTGGCTACAGGGTAGCAGAGGATAGAATCAAGCTTTTATACAGCCTTGACTTTATCTCTGACCTCCAGACCTGGCTTCCCTCTCCTGGCAGGGTGCCACCTACGCGCCGATGCCCCGAGTGTTCACAGGGCTTCCAGCTAA ..........................................................................................................................................................................................................................................................................................................................................................................................(((...((..((...((((....((((.((((((.(((((((.......))).)))).)))))))))).........))))....))..))...))).................................................... .........................................................................................................................................................................................................................................................................................................................................................................................378................................................................................................477................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM179088(GSM179088) Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................................................................................................................................CACTCTCTCTTTATTCCCTAGTCC........................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................................................................................................................................................................................................................CAGGCTTCTTTGTTAGGGC................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................................TACACTCTCTCTTTATTCCCTAGTCCCCAAG................................................................................................................................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................TCACCAGGCTTCTTTGTTAGGGCTTCT............................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................CCCTAGTCCCCAAGAtggt.................................................................................................................................................................................................................. | 19 | tggt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................................................................................................................GCGTATGTCTGTGTATGGGTG........................................................................................................................................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..........................................................................ACCATCACCCCAACCTGAAGTTTTTA........................................................................................................................................................................................................................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................TTCTTTGTTAGGGCTTCT............................................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - |