| Gene: Exosc1 | ID: uc008hmm.1_intron_4_0_chr19_42002604_r.3p | SPECIES: mm9 |
|
|
|
(1) PIWI.ip |
(1) PIWI.mut |
(6) TESTES |
| GTAGACAGCAGACACACATGTGGTACACACACATACATGTAGGCAAAACACTCATCGCATCAGATAACTCTAAAAATAAAAGCAAAACCAAGCAAAGACCCTTCAATCTGAGCTAAAGTCCTAGTAATCCCTCCTTGCTCTCCGGCTCCCTGAGTGACAGCAGCCGGTGCCCTGGTGCTGACCCTTTCTCTGCCCCCTAGGTCTCTAGCATCAACTCACGGTTTGCCAAAGTACACATCCTGTATGTGGG .............................................................................................................((((.......................))))...(((.....(((...(((((.((((....)))))))))...))).....)))........................................................ ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................CTCCTTGCTCTCCGGCTCCCTGAGTGACAGCAGCCGGTGCCCTGGTGCTGAC.................................................................... | 52 | 1 | 34.00 | 34.00 | 34.00 | - | - | - | - | - |
| .............................................................................................................................................................................................................TAGCATCAACTCACGGTTTGCCAAAGT.................. | 27 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | 1.00 |
| ......................................................................................................................................................................................................AGGTCTCTAGCATCAACTCACGGTTTa......................... | 27 | a | 1.00 | 0.00 | - | - | 1.00 | - | - | - |
| .......................................TAGGCAAAACACTCATCGCATCAGATA........................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - |
| GTAGACAGCAGACACACATGTGGTACACACACATACATGTAGGCAAAACACTCATCGCATCAGATAACTCTAAAAATAAAAGCAAAACCAAGCAAAGACCCTTCAATCTGAGCTAAAGTCCTAGTAATCCCTCCTTGCTCTCCGGCTCCCTGAGTGACAGCAGCCGGTGCCCTGGTGCTGACCCTTTCTCTGCCCCCTAGGTCTCTAGCATCAACTCACGGTTTGCCAAAGTACACATCCTGTATGTGGG .............................................................................................................((((.......................))))...(((.....(((...(((((.((((....)))))))))...))).....)))........................................................ ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| ....CAGACACACATGTGGTACACAgaga............................................................................................................................................................................................................................. | 25 | gaga | 1.00 | 0.00 | - | - | - | - | 1.00 | - |