| Gene: Acta2 | ID: uc008hgg.1_intron_4_0_chr19_34321227_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(10) TESTES |
| TGACAGAGGCACCACTGAACCCTAAGGCCAACCGGGAGAAAATGACCCAGGTAAATATTTGCTCCAGGATCTAACCCTGGTGAATTTGGGGCATGGGCAACCAGGATAACTTGCAGCACGACAGGCAGACATAAGGTCCAAACTGACAGTTCACCAACAGACTGACCCAGGAACCCCAAAGCCCCGGAATCTTAGTGTTCACACCCTTACTCCACAAAACAACATAATTTTGCCTCAAAGGGCAAGAAGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................TTGGGGCATGGGCAACCAGGATAACTTGCAGCACGACAGGCAGACATAAGGT................................................................................................................. | 52 | 1 | 96.00 | 96.00 | 96.00 | - | - | - | - | - | - | - | - | - | - |
| .............................AACCGGGAGAAAATGACCCAG........................................................................................................................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................GTAAATATTTGCTCCAGGATCTAA................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ............CACTGAACCCTAAGGCCAACCGGGAGAAAA................................................................................................................................................................................................................ | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................................................................................................AGTTCACCAACAGACTGACCCAGGAACC........................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .......................AAGGCCAACCGGGAGAAAATGACCC.......................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......AGGCACCACTGAACCCTAAGGC.............................................................................................................................................................................................................................. | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............CTGAACCCTAAGGCCAAC.......................................................................................................................................................................................................................... | 18 | 5 | 0.40 | 0.40 | - | 0.40 | - | - | - | - | - | - | - | - | - |
| ................GAACCCTAAGGCCAACC......................................................................................................................................................................................................................... | 17 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | 0.20 | - |
| ..............CTGAACCCTAAGGCC............................................................................................................................................................................................................................. | 15 | 10 | 0.10 | 0.10 | - | - | - | - | - | - | - | - | - | - | 0.10 |
| TGACAGAGGCACCACTGAACCCTAAGGCCAACCGGGAGAAAATGACCCAGGTAAATATTTGCTCCAGGATCTAACCCTGGTGAATTTGGGGCATGGGCAACCAGGATAACTTGCAGCACGACAGGCAGACATAAGGTCCAAACTGACAGTTCACCAACAGACTGACCCAGGAACCCCAAAGCCCCGGAATCTTAGTGTTCACACCCTTACTCCACAAAACAACATAATTTTGCCTCAAAGGGCAAGAAGA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........ACCACTGAACCCTAAtc................................................................................................................................................................................................................................. | 17 | tc | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........ACCACTGAACCCTAAG................................................................................................................................................................................................................................ | 16 | 3 | 0.67 | 0.67 | - | 0.67 | - | - | - | - | - | - | - | - | - |
| ......ACCACTGAACCCTAAGtcga................................................................................................................................................................................................................................ | 20 | tcga | 0.33 | 0.00 | - | - | - | - | 0.33 | - | - | - | - | - | - |
| ........ACCACTGAACCCTAAGtc................................................................................................................................................................................................................................ | 18 | tc | 0.33 | 0.00 | - | - | - | - | 0.33 | - | - | - | - | - | - |