| Gene: C030046E11Rik | ID: uc008hdr.1_intron_6_0_chr19_29643924_f.3p | SPECIES: mm9 |
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(2) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(9) TESTES |
| TGGAAAATGTTAGGAATTTCTAGAATATTTAGAAAGGAAATAGCCATCACTGCCTAAGCATTTGTTCGGGCTAATGAGATGACTAATTACTTACAGAATGGTTTTCTACTTTGTACACCTTTCACTAGAACATAGATTCCCATGATAGTGCCTTTCTGTTTATATTGGTCATTTTTCACTAACAGTATTTGTTTTCACAGTGGCTGTGTGCAGGTTTATACAATCGACAACACTACAGGAGCCATGCTGC ...............................................................................................................................(((.((((((.....((.(((((((..............))........))))).))..)))))).)))...................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................TAAGCATTTGTTCGGGCTAATGAGATGACTAATTACTTACAGAATGGTTTTC................................................................................................................................................ | 52 | 1 | 34.00 | 34.00 | 34.00 | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................TTCACAGTGGCTGTtccg....................................... | 18 | tccg | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................................................................................................................................................................TTATACAATCGACAACACTACAGGAGCC....... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................TGTTCGGGCTAATGAGAT.......................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................................................................ATACAATCGACAACACTACAGGAGCCAT..... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| TGGAAAATGTTAGGAATTTCTAGAATATTTAGAAAGGAAATAGCCATCACTGCCTAAGCATTTGTTCGGGCTAATGAGATGACTAATTACTTACAGAATGGTTTTCTACTTTGTACACCTTTCACTAGAACATAGATTCCCATGATAGTGCCTTTCTGTTTATATTGGTCATTTTTCACTAACAGTATTTGTTTTCACAGTGGCTGTGTGCAGGTTTATACAATCGACAACACTACAGGAGCCATGCTGC ...............................................................................................................................(((.((((((.....((.(((((((..............))........))))).))..)))))).)))...................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| .....................................................................................................................................................................................................................TATACAATCGACgtt...................... | 15 | gtt | 14.00 | 0.00 | - | 7.00 | 5.00 | 2.00 | - | - | - | - | - |
| ..............................AAGGAAATAGCCATCgtt.......................................................................................................................................................................................................... | 18 | gtt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 |
| ....................................................................................................................................................................................................................TATACAATCGACgttt...................... | 16 | gttt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - |