| Gene: Dmrt3 | ID: uc008hbk.1_intron_0_0_chr19_25685758_f.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(2) PIWI.ip |
(1) PIWI.mut |
(9) TESTES |
| ACAGCATTCTGAGAAAACATTGATTGCACCATCTTTGTTTACTGACCCCAGTCCCTGACTCCCTTTGCCAATGACTTTTGATTTCTTCTTTAAAGGCTGGCAGTGTGTTATGACCCATTGAGCCAAACTCCCTCATCCCAGAAGGCTTGACTCTGAGCACATCAGGAAGGGGTTAACCCAACTGTTCTCTTGCCTTTCAGATCTGACAGAAGAGAGAGTTGGGGACAGCAGTTCCACGGACAACACTGCG ....................................................................................................(((((.((....)).)))))....................((((((..((.(((((.....)))))..(((.....)))........))..))))))..................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................GCCAATGACTTTTGATTTCTTCTTTAAAGGCTGGCAGTGTGTTATGACCCAT.................................................................................................................................... | 52 | 1 | 23.00 | 23.00 | 23.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................GACAGAAGAGAGAGTTGGGGACAGC..................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TCTGACAGAAGAGAGAGTTGGGGACAG...................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| .............................................................................................................................................................................................................ACAGAAGAGAGAGTTGGGGACAGCAG................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................................................................................................................................................GATCTGACAGAAGAGAGAGTTGGGGA......................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................................................................................................................TTCAGATCTGACAGAAGAGAGAGTTG............................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................................................................................................TCTGACAGAAGAGAtggg............................... | 18 | tggg | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................................TGCCTTTCAGATCTGACAGAAGAGAGA................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................CTGACAGAAGAGAGAGTTGGGGACAGC..................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................................................................................AAGAGAGAGTTGGGGACAGCA.................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| .........................................................................................................................................................................................................TCTGACAGAAGAGAGAGTTGGGGACA....................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| .......................................................................................................................................................................................................GATCTGACAGAAGAGAGAGTTGGGGAC........................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TGACAGAAGAGAGAGTTGGGGACAGCAG................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................ACAGCAGTTCCACGGACAACACTGCG | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................................TGACAGAAGAGAGAGTTGGGGACAGCAGT.................. | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TGACAGAAGAGAGAGTTGGGGACAGa..................... | 26 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - |
| ACAGCATTCTGAGAAAACATTGATTGCACCATCTTTGTTTACTGACCCCAGTCCCTGACTCCCTTTGCCAATGACTTTTGATTTCTTCTTTAAAGGCTGGCAGTGTGTTATGACCCATTGAGCCAAACTCCCTCATCCCAGAAGGCTTGACTCTGAGCACATCAGGAAGGGGTTAACCCAACTGTTCTCTTGCCTTTCAGATCTGACAGAAGAGAGAGTTGGGGACAGCAGTTCCACGGACAACACTGCG ....................................................................................................(((((.((....)).)))))....................((((((..((.(((((.....)))))..(((.....)))........))..))))))..................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................................................................GTTGGGGACAGCAGTTCCACGGACAA....... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 |