| Gene: Klf9 | ID: uc008gzz.1_intron_0_0_chr19_23216750_f.5p | SPECIES: mm9 |
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(1) OTHER.ip |
(6) OTHER.mut |
(4) PIWI.ip |
(2) PIWI.mut |
(23) TESTES |
| AGTCTATGGAAAATCCTCCCATCTTAAAGCCCATTACAGAGTGCATACAGGTTAGCGGCGTCGCCTCTCCCCCGCTTCGGGCTTTAGCTAACCTTTGGCCGGCCAGCATTCCTGGGCGCCCAGGACACCGCACTCGGCCTAGAGGCTGCAAACATTTTGGAGAAGATGCTGCTTAACTCCTGCACTCTCTCCTTACTTGGCTCCAACCTTTAGGAGCCACCCGAACCCACCCCCACCCCCCCAACCGCCG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................GAGGCTGCAAACATTTTGGAGAAGATG.................................................................................. | 27 | 1 | 5.00 | 5.00 | 3.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................GAGGCTGCAAACATTTTGGAGAAGATGC................................................................................. | 28 | 1 | 4.00 | 4.00 | 3.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TAGAGGCTGCAAACATTTTGGAGAAG..................................................................................... | 26 | 1 | 4.00 | 4.00 | - | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................TAGAGGCTGCAAACATTTTGGAGAAGA.................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................AGAGGCTGCAAACATTTTGGAGAAGATGC................................................................................. | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TTACAGAGTGCATACAGGTTAGCGGC............................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................TTCGGGCTTTAGCTAACCTTTGGCCGGC................................................................................................................................................... | 28 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................GAGGCTGCAAACATTTTGGAGAAGATGCT................................................................................ | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................CCAGGACACCGCACTCGGCCTAGAGGCTa...................................................................................................... | 29 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .....................................................................................................................................................................ATGCTGCTTAACTCCTGCACTCTCTC........................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................GCATACAGGTTAGCGGCGTCGCCTCT...................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................TTCGGGCTTTAGCTAACCTTTGGCCGG.................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................GCCCATTACAGAGTGCATACAGGTTAGC.................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................TGCTGCTTAACTCCTG.................................................................... | 16 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................TTACAGAGTGCATACAGGTTAGCGGCGT............................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................AGGCTGCAAACATTTTGGAGAAGAT................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................ACAGGTTAGCGGCGTCGCCTCTCCCC.................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............TCCTCCCATCTTAAAGCCCATTACAGAG................................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................CAGGACACCGCACTCGGCCTAGAGG......................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................GAGGCTGCAAACATTTTGGAGAAGATGCTG............................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ............................GCCCATTACAGAGTGCATACAGGTTAGCGt................................................................................................................................................................................................ | 30 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TGCAAACATTTTGGAGAAGATGCTGC.............................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................GGCTGCAAACATTTTGGAGAAGATGCT................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................TTCGGGCTTTAGCTAACCTTTGGCCGGCC.................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................AGAGTGCATACAGGTTAGCGGCGTC............................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCCCATCTTAAAGCCCATTACAGAGTGC.............................................................................................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGTCTATGGAAAATCCTCCCATCTTAAAGCCCATTACAGAGTGCATACAGGTTAGCGGCGTCGCCTCTCCCCCGCTTCGGGCTTTAGCTAACCTTTGGCCGGCCAGCATTCCTGGGCGCCCAGGACACCGCACTCGGCCTAGAGGCTGCAAACATTTTGGAGAAGATGCTGCTTAACTCCTGCACTCTCTCCTTACTTGGCTCCAACCTTTAGGAGCCACCCGAACCCACCCCCACCCCCCCAACCGCCG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT1() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR051939(GSM545783) Mov10L1-associated piRNAs. (mov10L testes) | GSM475281(GSM475281) total RNA. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................................................................................CTCTCCTTACTTGGCTCCAACCTTTA...................................... | 26 | 1 | 13.00 | 13.00 | 1.00 | 3.00 | - | 1.00 | 1.00 | - | 1.00 | - | - | - | 1.00 | - | - | 2.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................TCTCTCCTTACTTGGCTCCAACCTTTA...................................... | 27 | 1 | 12.00 | 12.00 | - | 5.00 | - | 2.00 | - | - | - | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - |
| ...........AATCCTCCCATCTTAAAGCCCATTACA.................................................................................................................................................................................................................... | 27 | 1 | 8.00 | 8.00 | - | - | 6.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................CATCTTAAAGCCCATTACAGAGTGCA............................................................................................................................................................................................................. | 26 | 1 | 6.00 | 6.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................TCTCCTTACTTGGCTCCAACCTTTA...................................... | 25 | 1 | 6.00 | 6.00 | 1.00 | - | - | - | 3.00 | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................CATCTTAAAGCCCATTACAGAGTGCATA........................................................................................................................................................................................................... | 28 | 1 | 4.00 | 4.00 | - | - | - | 1.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................CCATCTTAAAGCCCATTACAGAGTGCATA........................................................................................................................................................................................................... | 29 | 1 | 4.00 | 4.00 | - | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............CCTCCCATCTTAAAGCCCATTACAGA.................................................................................................................................................................................................................. | 26 | 1 | 3.00 | 3.00 | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCCCATCTTAAAGCCCATTACAGAGTGCA............................................................................................................................................................................................................. | 29 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................CCATCTTAAAGCCCATTACAGAGTGCA............................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................................CCTAGAGGCTGCAAACATTTTGGAGA....................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................ATCTTAAAGCCCATTACAGAGTGCATAt........................................................................................................................................................................................................... | 28 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................CATCTTAAAGCCCATTACAGAGTGCAT............................................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................ATCTTAAAGCCCATTACAGAGTGCATAa........................................................................................................................................................................................................... | 28 | a | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............CCTCCCATCTTAAAGCCCATTACAGAGTG............................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GCTGCAAACATTTTGGAGAA...................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................CTCCTTACTTGGCTCCAACCTTTA...................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................CCATCTTAAAGCCCATTACAGAGTGC.............................................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................CTCTCCCCCGCTTCGGGCTTTAGCTA................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................TCCCATCTTAAAGCCCATTACA.................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .................CCCATCTTAAAGCCCATTACAGAGTG............................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................CTCTCCCCCGCTTCGGGCTTTAGCT................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TCCTTACTTGGCTCCAACCTTTA...................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CTGCACTCTCTCCTTACTTGGCTCCA............................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .........AAAATCCTCCCATCTTAAAGCCCATTACA.................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................TCCTTACTTGGCTCCAAC........................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - |