| Gene: BC016495 | ID: uc008gxt.1_intron_0_0_chr19_18706490_f.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(15) TESTES |
| AGGCCCTGCGTAGGGGAGGCTATGAAAGCGCAGTGGACTTCGCTGCCTAGGTGAGCACCGGGCAGTGGTAGGCATGAAACGCTCTTGAAGCTTGCTCTGCGACCCTGCTGGGAAGGATTCGAACCCGCTTCGGTGAGTACCCACTGCCTGCTGCGTACACACGGCGAGGCCTGGGAATCTTCAAGAGTCTCCTTCGCTGTATGTACCAGGAACCTGATCGTGTCTAGGGAAACCGCGGTGGGACTTAGAT ..................................................((((((..((((.((((............))))))))..))))))........................................................................................................................................................... ..................................................51.....................................................106.............................................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesWT3() Testes Data. (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................TGAGCACCGGGCAGTGGTAGG.................................................................................................................................................................................. | 21 | 1 | 5.00 | 5.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................ACCGGGCAGTGGTAGGCA................................................................................................................................................................................ | 18 | 2 | 2.50 | 2.50 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - |
| ...................................................TGAGCACCGGGCAGTGGT..................................................................................................................................................................................... | 18 | 2 | 2.00 | 2.00 | - | - | 0.50 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 0.50 |
| ..........................................................CGGGCAGTGGTAGGCATG.............................................................................................................................................................................. | 18 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TCTTGAAGCTTGCTCTGCGACCCTGC.............................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................GACTTCGCTGCCTAGGTGA.................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ................................................................GTGGTAGGCATGAAACG......................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................GTGGTAGGCATGAAACGCTCTTGA.................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................ACCGGGCAGTGGTAGGCATGAA............................................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................TCTTGAAGCTTGCTCTGC...................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................CGGGCAGTGGTAGGCATGAAACGC........................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............GGGGAGGCTATGAAAGCGCAGTGGACT................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................TGGGAAGGATTCGAACCCGCTTCGGT.................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TGAGCACCGGGCAGTGGTAGGCATGAA............................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................TGCGACCCTGCTGGGAAGGATTCGAACCC............................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................ACCGGGCAGTGGTAGGCt................................................................................................................................................................................ | 18 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................AGGTGAGCACCGGGCAGTGGTAGGCAT............................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................GCACCGGGCAGTGGTAGtca................................................................................................................................................................................ | 20 | tca | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TGAAACGCTCTTGAAGCTTGCTCTGCGACC.................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................GAGCACCGGGCAGTGGTAGGCATGAA............................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................TAGGCATGAAACGCTCTTGAAGCTTGCT.......................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................ACCGGGCAGTGGTAGGtc................................................................................................................................................................................ | 18 | tc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................ACCGGGCAGTGGTAGGCATG.............................................................................................................................................................................. | 20 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................CGGGCAGTGGTAGGCATGA............................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................GGGCAGTGGTAGGCATGA............................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TGAGCACCGGGCAGTGG...................................................................................................................................................................................... | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - |
| ...........................................................GGGCAGTGGTAGGCATG.............................................................................................................................................................................. | 17 | 3 | 0.33 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TGAGCACCGGGCAGTGGaagg.................................................................................................................................................................................. | 21 | aagg | 0.33 | 0.33 | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGGCCCTGCGTAGGGGAGGCTATGAAAGCGCAGTGGACTTCGCTGCCTAGGTGAGCACCGGGCAGTGGTAGGCATGAAACGCTCTTGAAGCTTGCTCTGCGACCCTGCTGGGAAGGATTCGAACCCGCTTCGGTGAGTACCCACTGCCTGCTGCGTACACACGGCGAGGCCTGGGAATCTTCAAGAGTCTCCTTCGCTGTATGTACCAGGAACCTGATCGTGTCTAGGGAAACCGCGGTGGGACTTAGAT ..................................................((((((..((((.((((............))))))))..))))))........................................................................................................................................................... ..................................................51.....................................................106.............................................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | mjTestesWT3() Testes Data. (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................GGGAAGGATTCGAACc.............................................................................................................................. | 16 | c | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................GCTGGGAAGGATTCGAACCca............................................................................................................................. | 21 | ca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |