| Gene: Ms4a3 | ID: uc008gsp.1_intron_0_0_chr19_11704247_r.3p | SPECIES: mm9 |
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(10) OTHER.mut |
(1) OVARY |
(1) PIWI.ip |
(22) TESTES |
| ACCCACAGAAATGGAAATAAAAATGTTCTGATGGTCTCTGGTCCACATGCATGTTATCACTTTTCAGTGTTTAACAGAGAAATCATCAGGGCAGAAATCTTTGTGGATTCGTGATAGTGATCATGGTGGTAATGAGAAAGGATGGAGTGAACAGGGAAGATGATGATCCTCTTCTTGAGAACTGATGTCTCATTTTCTAGGCAATTACTTCACCTCCTAATTCTGTGGAGTCAGGAATACTTCCTGAAGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037899(GSM510435) ovary_rep4. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................................................................................GAGTGAACAGGGAAGAgc........................................................................................ | 18 | gc | 278.40 | 82.60 | 99.40 | 88.40 | 26.40 | 15.40 | 21.60 | 7.40 | 1.60 | 9.00 | 6.00 | 1.60 | 1.00 | - | - | - | - | 0.20 | 0.20 | 0.20 | - | - | - | - | - |
| ................................................................................................................................................GAGTGAACAGGGAAGA.......................................................................................... | 16 | 5 | 82.60 | 82.60 | 9.40 | 26.40 | 1.60 | 16.40 | 10.60 | 4.00 | 8.40 | 1.20 | 1.40 | 2.00 | 0.80 | - | 0.40 | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GAGTGAACAGGGAAGAgcc....................................................................................... | 19 | gcc | 67.80 | 82.60 | 28.60 | 4.20 | 18.80 | 2.40 | 0.60 | 4.80 | 6.40 | 0.20 | 0.80 | 0.40 | 0.20 | - | 0.20 | - | - | - | - | - | 0.20 | - | - | - | - |
| .................................................................................................................................................AGTGAACAGGGAAGAgc........................................................................................ | 17 | gc | 42.47 | 5.94 | 10.65 | 11.18 | 5.65 | 2.35 | 3.00 | 4.18 | 3.71 | 0.12 | 0.94 | 0.35 | 0.12 | - | - | - | - | 0.18 | - | - | - | - | - | 0.06 | - |
| ................................................................................................................................................GAGTGAACAGGGAAGAgccc...................................................................................... | 20 | gccc | 25.20 | 82.60 | 0.80 | 2.20 | 11.40 | 1.00 | 0.60 | 5.20 | 2.20 | 0.20 | 0.40 | 0.20 | 0.20 | - | 0.40 | - | - | 0.20 | - | - | - | 0.20 | - | - | - |
| .................................................................................................................................................AGTGAACAGGGAAGAgcc....................................................................................... | 18 | gcc | 15.71 | 5.94 | 2.24 | 0.53 | 4.76 | 1.24 | 0.12 | 3.24 | 3.06 | - | 0.12 | 0.18 | 0.06 | - | 0.06 | - | - | 0.06 | 0.06 | - | - | - | - | - | - |
| .................................................................................................................................................AGTGAACAGGGAAGAgccc...................................................................................... | 19 | gccc | 10.82 | 5.94 | 2.06 | 0.59 | 4.06 | 1.41 | - | 0.41 | 1.76 | - | 0.06 | 0.24 | 0.06 | - | - | - | - | - | 0.06 | 0.06 | - | - | - | - | 0.06 |
| ................................................................................................................................................GAGTGAACAGGGAAG........................................................................................... | 15 | 14 | 7.71 | 7.71 | 3.29 | 1.64 | 1.07 | 0.93 | 0.14 | - | - | 0.07 | 0.07 | 0.21 | 0.07 | - | 0.21 | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AGTGAACAGGGAAGA.......................................................................................... | 15 | 17 | 5.94 | 5.94 | - | 2.53 | 0.47 | 0.18 | 0.18 | 0.53 | 0.47 | - | 0.24 | 0.94 | 0.24 | - | 0.06 | - | - | 0.12 | - | - | - | - | - | - | - |
| ................................................................................................................................................GAGTGAACAGGGAAGAT......................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TGAACAGGGAAGATaggt..................................................................................... | 18 | aggt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TGAGAAAGGATGGAGccag................................................................................................... | 19 | ccag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AGTGAACAGGGAAGATccc...................................................................................... | 19 | ccc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TGTGGAGTCAGGAATACTTCCTGAAGG | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................GTGAACAGGGAAGATccc...................................................................................... | 18 | ccc | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................GTGAACAGGGAAGATcc....................................................................................... | 17 | cc | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................GTGAACAGGGAAGATc........................................................................................ | 16 | c | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................GGAGTGAACAGGGAAGAgc........................................................................................ | 19 | gc | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AGTGAACAGGGAAGAgct....................................................................................... | 18 | gct | 0.29 | 5.94 | - | - | - | 0.12 | 0.12 | - | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GAGTGAACAGGGAAGAccc....................................................................................... | 19 | ccc | 0.20 | 82.60 | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GAGTGAACAGGGAAGAcc........................................................................................ | 18 | cc | 0.20 | 82.60 | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GAGTGAACAGGGAAGAcgga...................................................................................... | 20 | cgga | 0.20 | 82.60 | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GAGTGAACAGGGAAGAgctc...................................................................................... | 20 | gctc | 0.20 | 82.60 | - | - | - | - | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................GAGTGAACAGGGAAGAgt........................................................................................ | 18 | gt | 0.20 | 82.60 | - | - | - | - | - | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AGTGAACAGGGAAGAgact...................................................................................... | 19 | gact | 0.06 | 5.94 | - | - | - | - | - | - | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AGTGAACAGGGAAGAcg........................................................................................ | 17 | cg | 0.06 | 5.94 | - | - | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AGTGAACAGGGAAGAcctg...................................................................................... | 19 | cctg | 0.06 | 5.94 | - | - | - | - | - | - | - | - | - | - | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AGTGAACAGGGAAGAgcct...................................................................................... | 19 | gcct | 0.06 | 5.94 | - | - | - | 0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................AGTGAACAGGGAAGAgcg....................................................................................... | 18 | gcg | 0.06 | 5.94 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.06 | - | - |
| ACCCACAGAAATGGAAATAAAAATGTTCTGATGGTCTCTGGTCCACATGCATGTTATCACTTTTCAGTGTTTAACAGAGAAATCATCAGGGCAGAAATCTTTGTGGATTCGTGATAGTGATCATGGTGGTAATGAGAAAGGATGGAGTGAACAGGGAAGATGATGATCCTCTTCTTGAGAACTGATGTCTCATTTTCTAGGCAATTACTTCACCTCCTAATTCTGTGGAGTCAGGAATACTTCCTGAAGG |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | mjTestesWT2() Testes Data. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037899(GSM510435) ovary_rep4. (ovary) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................GTTCTGATGGTCTCTggag................................................................................................................................................................................................................... | 19 | ggag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................TGGTCCACATGCATGTtt.................................................................................................................................................................................................... | 18 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |