| Gene: Atg2a | ID: uc008ghu.1_intron_12_0_chr19_6250268_f | SPECIES: mm9 |
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(5) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(1) TDRD1.ip |
(20) TESTES |
| TGGCCCCCCAGCTCCTACCCGCCTGGAACTTACTTGCTCAGACCTGCAAGGTAATCCTGTCTAGGAAACAGCTGGGGTGGGCCCCAGGACAGGTGTCCCTTTTTATCCCAGGGACACGGATGTGACTCTGGGGGAGCAATGGTGAGGAACAGGGAAGAGGCAGCTATGAGGCCCTGTCCTTTCTGTCCCCTCCAGGAATCTACGAAGATGGAGAGAAGCCACCAGTCCCCTGCCTGCGGGTCTCC ...............................................................................................................................(((((((..((.....((((.((((((......((....))...))))))))))..))..))).)))).................................................. ...........................................................................................................................124....................................................................195................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAg................................................................................................ | 23 | g | 6.00 | 0.00 | 6.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TCTGGGGGAGCAATGGTGAGG.................................................................................................. | 21 | 1 | 6.00 | 6.00 | - | 4.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAAa............................................................................................... | 24 | a | 3.00 | 0.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGt................................................. | 22 | t | 3.00 | 0.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................................................................................................TGGGGGAGCAATGGTGAGGAACAGG............................................................................................ | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................CCTGGAACTTACTTGCTCAGACCTGCA..................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAACAGG............................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAAt............................................................................................... | 24 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAAC............................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................GAAGATGGAGAGAAGCCACCA..................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................TCTACGAAGATGGAGAGAAGCC......................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................................................................................................TGGGGGAGCAATGGTGAGGAACAGGGA.......................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAAagt............................................................................................. | 26 | agt | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAtt................................................. | 22 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................CTGGAACTTACTTGCTCAGACCTGCA..................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............TACCCGCCTGGAACTTACTTGCTCAGACC......................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................................................................................TGAGGAACAGGGAAGAGGCAGCTATGA............................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..........................................................................................................................................ATGGTGAGGAACAGGGAAGAGGCAat................................................................................. | 26 | at | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................................................................................TGAGGAACAGGGAAGAG...................................................................................... | 17 | 5 | 0.20 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TGGCCCCCCAGCTCCTACCCGCCTGGAACTTACTTGCTCAGACCTGCAAGGTAATCCTGTCTAGGAAACAGCTGGGGTGGGCCCCAGGACAGGTGTCCCTTTTTATCCCAGGGACACGGATGTGACTCTGGGGGAGCAATGGTGAGGAACAGGGAAGAGGCAGCTATGAGGCCCTGTCCTTTCTGTCCCCTCCAGGAATCTACGAAGATGGAGAGAAGCCACCAGTCCCCTGCCTGCGGGTCTCC ...............................................................................................................................(((((((..((.....((((.((((((......((....))...))))))))))..))..))).)))).................................................. ...........................................................................................................................124....................................................................195................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesWT2() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| ...........................................................................................................................................................................TGTCCTTTCTGTCCCCaaa....................................................... | 19 | aaa | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................CCTGTCCTTTCTGTCCCCaca....................................................... | 21 | aca | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |