| Gene: Pcnxl3 | ID: uc008ger.1_intron_9_0_chr19_5679471_r | SPECIES: mm9 |
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(6) OTHER.mut |
(2) OVARY |
(22) TESTES |
| CACACTCTTCTCTGCCTCTTTCTTCTTTTGTGCCCGAGATGTGGCCACTGGTAAGACAGGGCAAGATTGACCCAAGGGAGTGAGTCTGAAGGGTGGGCCCAGGAGAGGCTGGCAGGCTAACTGGTCCTTCACTTCCTACTCCTGGACAGTGTTCACCTTATGCTTTCCGTTCGTCTTCCTCCTGGGCCTCCTGCCCCAG ..........................................................(((((....)).)))..((((((.((...((((...(((.((((....((((....))))..)))).)))...))))))))))))........................................................ ..................................................51................................................................................................149................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................TTCACTTCCTACTCCTGGACAGT................................................. | 23 | 1 | 24.00 | 24.00 | - | 3.00 | - | 4.00 | 1.00 | 2.00 | 1.00 | 2.00 | 1.00 | 2.00 | - | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | 1.00 |
| ...............................................................................................................................TTCACTTCCTACTCCTGGACAGa................................................. | 23 | a | 13.00 | 8.00 | 6.00 | - | 4.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................TTCACTTCCTACTCCTGGACAG.................................................. | 22 | 1 | 8.00 | 8.00 | 6.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...............................................................................................................................TTCACTTCCTACTCCTGGACA................................................... | 21 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TTCACTTCCTACTCCTGGACt................................................... | 21 | t | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTAAGACAGGGCAAGATTGACCCAAGG.......................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TTCACTTCCTACTCCTGGACAGTa................................................ | 24 | a | 1.00 | 24.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................TTCACTTCCTACTCCTGGAta................................................... | 21 | ta | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TTTCCGTTCGTCTTCCTCCTGGGCC........... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ................................CCCGAGATGTGGCCACTG..................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| CACACTCTTCTCTGCCTCTTTCTTCTTTTGTGCCCGAGATGTGGCCACTGGTAAGACAGGGCAAGATTGACCCAAGGGAGTGAGTCTGAAGGGTGGGCCCAGGAGAGGCTGGCAGGCTAACTGGTCCTTCACTTCCTACTCCTGGACAGTGTTCACCTTATGCTTTCCGTTCGTCTTCCTCCTGGGCCTCCTGCCCCAG ..........................................................(((((....)).)))..((((((.((...((((...(((.((((....((((....))))..)))).)))...))))))))))))........................................................ ..................................................51................................................................................................149................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesWT3() Testes Data. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | GSM475281(GSM475281) total RNA. (testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037903(GSM510439) testes_rep4. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
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| ................................................................................................................................TTCCTACTCCTGGttcc...................................................... | 17 | ttcc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |