| Gene: Pcnxl3 | ID: uc008ger.1_intron_8_0_chr19_5679004_r | SPECIES: mm9 |
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(4) OTHER.mut |
(1) OVARY |
(3) PIWI.ip |
(2) PIWI.mut |
(15) TESTES |
| CCTCATGTACCTCCTGGAGCAGATAGACATGCATGGCTTTGGAGGCACAGGTATGGTGCCCCCAGGAGGGTCTGCCCACAGGAGGGTCTGCCCACAGGAGGGTCTGCCCACAGGAGGGTCTGCCCACAGGAGGGTCTGCAGCTCTGGTTCTTACAGAGCCTTTTCCTGCTTCTGGAGTCTGGCTGCAGGGGCCCCATCCTGCCTGTCCTCTTTTATCCCCTCTCGTTTTCTTTCCTCTCTCTTCCCCAGCAATGGTTTCAGCCCAGAACACTAGAAGCTCTGAAGGCCGAGTGGAGGAGGGTGGTGTCATGGGAGGTCTTGTGGGAATGGAGGAACAGTGGGACAGGGTGACAGGGTGAGACCCATAGATCAGAGCTGGGCTTCACCCATTTCTCCCTGCTTCCAGCTGCCACCAGCCCACTCACTGCGGTCTTCAGCCTCACGCGAAGCCTGCTG ..................................................................................................................................................................................................................................................................................................................(((..((....))..)))..............((((((((((.((..((((((..((((...........))))..))))))...)).))))).)))))................................................... ..................................................................................................................................................................................................................................................................................................................307................................................................................................406................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................................................................................................................................................................TGGGACAGGGTGACAGGGTGAG................................................................................................ | 22 | 1 | 4.00 | 4.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................TGGGACAGGGTGACAGGGTGAGt............................................................................................... | 23 | t | 3.00 | 4.00 | - | - | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .......................TAGACATGCATGGCTTaaaa............................................................................................................................................................................................................................................................................................................................................................................................................................. | 20 | aaaa | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................TGGGACAGGGTGACAGGGTGA................................................................................................. | 21 | 2 | 1.50 | 1.50 | 0.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | 0.50 |
| ..................................................................................................................................................................................................................................................................................................................................................TGGGACAGGGTGACAGGGTGAGtat............................................................................................. | 25 | tat | 1.00 | 4.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................................................................................................................................CACCCATTTCTCCCTGCTTCCA................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................CTTCACCCATTTCTCCCTGCTT...................................................... | 22 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................................................................................................................................................AGTGGGACAGGGTGACAGGGTGt................................................................................................. | 23 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................TGGGACAGGGTGACAGGGTGAGA............................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....TGTACCTCCTGGAGCAGATAGACATGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................GCAGATAGACATGCATGGCTTTGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................GTGGGACAGGGTGACAGGGTGAat............................................................................................... | 24 | at | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ....................AGATAGACATGCATGGCTTTGGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................AGATAGACATGCATGGCTTTGGAGGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................ATAGACATGCATGGCTTTGGAGGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................TGGGACAGGGTGACAGGGTaa................................................................................................. | 21 | aa | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................................................................................................................................................................................................GTGGGACAGGGTGACAGGGTGAGA............................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................TAGACATGCATGGCTTaaa.............................................................................................................................................................................................................................................................................................................................................................................................................................. | 19 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................TGGGACAGGGTGACAGGGTGAGAt.............................................................................................. | 24 | t | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................AGATAGACATGCATGGCTTTGGAGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................TGGGACAGGGTGACAGGGTG.................................................................................................. | 20 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................TGGGACAGGGTGACAGGGTGAac............................................................................................... | 23 | ac | 0.50 | 1.50 | - | - | - | - | - | - | - | - | - | 0.50 | - | - | - | - | - | - |
| CCTCATGTACCTCCTGGAGCAGATAGACATGCATGGCTTTGGAGGCACAGGTATGGTGCCCCCAGGAGGGTCTGCCCACAGGAGGGTCTGCCCACAGGAGGGTCTGCCCACAGGAGGGTCTGCCCACAGGAGGGTCTGCAGCTCTGGTTCTTACAGAGCCTTTTCCTGCTTCTGGAGTCTGGCTGCAGGGGCCCCATCCTGCCTGTCCTCTTTTATCCCCTCTCGTTTTCTTTCCTCTCTCTTCCCCAGCAATGGTTTCAGCCCAGAACACTAGAAGCTCTGAAGGCCGAGTGGAGGAGGGTGGTGTCATGGGAGGTCTTGTGGGAATGGAGGAACAGTGGGACAGGGTGACAGGGTGAGACCCATAGATCAGAGCTGGGCTTCACCCATTTCTCCCTGCTTCCAGCTGCCACCAGCCCACTCACTGCGGTCTTCAGCCTCACGCGAAGCCTGCTG ..................................................................................................................................................................................................................................................................................................................(((..((....))..)))..............((((((((((.((..((((((..((((...........))))..))))))...)).))))).)))))................................................... ..................................................................................................................................................................................................................................................................................................................307................................................................................................406................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR037902(GSM510438) testes_rep3. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR037898(GSM510434) ovary_rep3. (ovary) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................................................................................................................................................GAACACTAGAAGCTcaaa................................................................................................................................................................................. | 18 | caaa | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................................................................................GGCCGAGTGGAGGAgctc.............................................................................................................................................................. | 18 | gctc | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .................................................TGGTGCCCCCAGGAactc..................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | actc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................AGACATGCATGGCTT................................................................................................................................................................................................................................................................................................................................................................................................................................. | 15 | 19 | 0.05 | 0.05 | - | 0.05 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |