(5)
OTHER.mut
(6)
PIWI.ip
(3)
PIWI.mut
(25)
TESTES

Sense strand
CACTGCTTCTGTCCTGCAGCAGCTGCCCCAGGAGCTCCTGTGTCCTTGAGGTATTGAGACTGCGGGAATTGAGGGCACTGAGTCTAGGCCTTGGGTGCTCAGCTCTTTGGGGACCCTGGAGGAAGTGGGAGGTACCAGGGAGGAAGGTCTCTGGGGACAGGACGTCCTCCCTTTGTCAAGTGGGCAAGACTCAGACACCAGTGACTGCTTTGATTTCCGTCCTGGTGAAAACTGTCCAGAATTTGGTGGCAACCCTCACTTTGAGCCTAGTTCCACAGCCAAGGTGTACAGGGGAGAACTGGGAGGCCCCGGTGCCCACTAGACCCAGTCACTAGCACCCCGAGAGGCAAAGCATCCCAGTTCAGCTCCCAGCCTTGACCTAAGCCTGGGATGGGGGCTGGAAACTTCAGCCCCAGGCAGACAAGGAAGTGGCCAGGAAAGCGGAAGCAGCTTTGATGGTCCCGGAGGGGGCCGGAAGCTAAATGGGGTGGTGGAAGACTGGGCTGGGGGCCTGAGTTCCTGTTTTCTCCCCAGGCCCATCTGAACAGCCCCCTCCTCCTGCAGTGCAGGAACCACTGAAGCCT
.................................................(((........(((...........)))((((((((..((((..(((((((.(((((((.((....)).))))).))..))).)))).(((((((..(((.(((....)))))).)))))))..........)))).))))))))..))).................................................................................................................................................................................................................................................................................................................................................................................................
..............................................47..........................................................................................................................................................203...........................................................................................................................................................................................................................................................................................................................................................................................
Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT2()
Testes Data. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT3()
Testes Data. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
.................................................GGTATTGAGACTGCGGGAATTGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 27 1 11.00 11.00 11.00 - - - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................TTGTCAAGTGGGCAAGACTCAGACACC................................................................................................................................................................................................................................................................................................................................................................................................. 27 1 4.00 4.00 - - 3.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................TTGAGACTGCGGGAATTGAGGGCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 1 2.00 2.00 - 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - -
......................................................TGAGACTGCGGGAATTGAGGGCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 1 2.00 2.00 - 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - -
...................................................TATTGAGACTGCGGGAATTGAGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 2.00 2.00 - - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
.....................................................TTGAGACTGCGGGAATTGAGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 1 2.00 2.00 - 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCCATCTGAACAG.................................... 16 3 2.00 2.00 - - - - - - - - - - - - - 2.00 - - - - - - - - - - -
.....................................................TTGAGACTGCGGGAATTGAGGGCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 2.00 2.00 - - 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - -
.................................................GGTATTGAGACTGCGGGAATTGAGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................GGCAAGACTCAGACACCAGTGACTGC........................................................................................................................................................................................................................................................................................................................................................................................ 26 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAAGCGGAAGCAGCTTTGATGGTCC.......................................................................................................................... 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................TTGTCAAGTGGGCAAGACTCAGACACCA................................................................................................................................................................................................................................................................................................................................................................................................ 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - 1.00 - - -
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAACAGCCCCCTCgcag......................... 21 gcag 1.00 0.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
...................................................................................................CAGCTCTTTGGGGACCCTGGAGGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
......................................................TGAGACTGCGGGAATTGAGGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 22 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - - - - - - - - -
.......................................................GAGACTGCGGGAATTGAGGGCACTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
.........................................................GACTGCGGGAATTGAGGGCACTGttt..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 ttt 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................TCTTTGGGGACCCTGGAGGAAGTGGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
....................................................ATTGAGACTGCGGGAATTGAGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCTGAACAGCCCCCTCCTCCTGCAGTGC................. 31 1 1.00 1.00 - - - - - - - - - - - - - - - - - - 1.00 - - - - - -
...........................................................................................................................................................................................................................................................................TAGTTCCACAGCCAAGGTGTACAGGGGc................................................................................................................................................................................................................................................................................................. 28 c 1.00 0.00 - - - - - - - - - - - - - - - - 1.00 - - - - - - - -
..............................................................................................................................................................................................................................TGGTGAAAACTGTCCAGAATTTGGTGG............................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - 1.00 - - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................TGTCCAGAATTTGGTGGCAACCCTCACT.................................................................................................................................................................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - - - - - - - - - - 1.00 - - - - - - -
......................................TGTGTCCTTGAGGTATTGAGACTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
......................................................TGAGACTGCGGGAATTGAGGGCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 24 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - 1.00 - -
......................................................TGAGACTGCGGGAATTGAGGGCACTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..............................................TGAGGTATTGAGACTGCGGGAATTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCCATCTGAACA..................................... 15 8 0.12 0.12 - - - - - - - 0.12 - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAAGACTGGGCTGG............................................................................. 16 8 0.12 0.12 - 0.12 - - - - - - - - - - - - - - - - - - - - - - -

Antisense strand
CACTGCTTCTGTCCTGCAGCAGCTGCCCCAGGAGCTCCTGTGTCCTTGAGGTATTGAGACTGCGGGAATTGAGGGCACTGAGTCTAGGCCTTGGGTGCTCAGCTCTTTGGGGACCCTGGAGGAAGTGGGAGGTACCAGGGAGGAAGGTCTCTGGGGACAGGACGTCCTCCCTTTGTCAAGTGGGCAAGACTCAGACACCAGTGACTGCTTTGATTTCCGTCCTGGTGAAAACTGTCCAGAATTTGGTGGCAACCCTCACTTTGAGCCTAGTTCCACAGCCAAGGTGTACAGGGGAGAACTGGGAGGCCCCGGTGCCCACTAGACCCAGTCACTAGCACCCCGAGAGGCAAAGCATCCCAGTTCAGCTCCCAGCCTTGACCTAAGCCTGGGATGGGGGCTGGAAACTTCAGCCCCAGGCAGACAAGGAAGTGGCCAGGAAAGCGGAAGCAGCTTTGATGGTCCCGGAGGGGGCCGGAAGCTAAATGGGGTGGTGGAAGACTGGGCTGGGGGCCTGAGTTCCTGTTTTCTCCCCAGGCCCATCTGAACAGCCCCCTCCTCCTGCAGTGCAGGAACCACTGAAGCCT
.................................................(((........(((...........)))((((((((..((((..(((((((.(((((((.((....)).))))).))..))).)))).(((((((..(((.(((....)))))).)))))))..........)))).))))))))..))).................................................................................................................................................................................................................................................................................................................................................................................................
..............................................47..........................................................................................................................................................203...........................................................................................................................................................................................................................................................................................................................................................................................
Size Perfect hit Total Norm Perfect Norm mjTestesWT4()
Testes Data. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
mjTestesWT2()
Testes Data. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesWT1()
Testes Data. (testes)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesWT3()
Testes Data. (testes)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
.............................................................................................................................................................................................................................................................CCTCACTTTGAGCCTAGTTCCACAGCCA............................................................................................................................................................................................................................................................................................................... 28 1 9.00 9.00 7.00 - - - 1.00 - 1.00 - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................................................................CCTAGTTCCACAGCCAAGGTGTACAg...................................................................................................................................................................................................................................................................................................... 26 g 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................................................................................................................................................................GTTCAGCTCCCAGCCTTGACCTA.......................................................................................................................................................................................................... 23 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................GATTTCCGTCCTGGTGAAAACTGTCCAGA........................................................................................................................................................................................................................................................................................................................................................ 29 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................................................................................................................................CCCGGTGCCCACTAGACCCAGTCACTA.......................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - - - - - - - - -
............................................................................................................................................................................................................................................................CCCTCACTTTGAGCCTAGTTCCA..................................................................................................................................................................................................................................................................................................................... 23 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................CCGTCCTGGTGAAAACTGTCCA.......................................................................................................................................................................................................................................................................................................................................................... 22 1 1.00 1.00 - - - - - - - - - 1.00 - - - - - - - - - - - - - - -
...........................CCAGGAGCTCCTGTGTCCTTGAGGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
.................AGCAGCTGCCCCAGGAGCTCCTGTGTCCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 30 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - - - - - - - - -
....................................................................................................................................................................................................................................................................................................................................................................CCAGTTCAGCTCCCAGCCTTGACCTA.......................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................TGGGCAAGACTCAGAacac..................................................................................................................................................................................................................................................................................................................................................................................................... 19 acac 1.00 0.00 - - - - - - - - - - - - - - - - - - - - 1.00 - - - -
...................CAGCTGCCCCAGGAGCTCCTGTGTCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - - 1.00
.................................GCTCCTGTGTCCTTGAGGTATTGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 26 1 1.00 1.00 - - - - - - - 1.00 - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................ATTTCCGTCCTGGTGAAAACTGTCCAGAA....................................................................................................................................................................................................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -
...................................................................................................................................................................................................CACCAGTGACTGCTTTGATTTCCGTCC.......................................................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - - - - - 1.00 -
.....................................................................................................................................................................................................................................................................AGCCTAGTTCCACAtg................................................................................................................................................................................................................................................................................................................... 16 tg 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................................................................................................................................................................................................TCCCAGTTCAGCTCCCAGCCTTGACCTA.......................................................................................................................................................................................................... 28 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................................................................................................................................................GCATCCCAGTTCAGCTCCCAGCCTTG............................................................................................................................................................................................................... 26 1 1.00 1.00 - - - - - - - - - - - - - - - - - - - 1.00 - - - - -
...................................................................................................................................................................................................................GATTTCCGTCCTGGTGAAAACTGTCCA.......................................................................................................................................................................................................................................................................................................................................................... 27 1 1.00 1.00 - - 1.00 - - - - - - - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................TTTGATTTCCGTCCTGGTGAAAACTGTCCA.......................................................................................................................................................................................................................................................................................................................................................... 30 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................................................................................GCCTAGTTCCACgtt.................................................................................................................................................................................................................................................................................................................... 15 gtt 1.00 0.00 - - - - - - - - - - - - 1.00 - - - - - - - - - - - -
......................................................................................................................................................................CCCTTTGTCAAGTGGGCAAGACTCgg........................................................................................................................................................................................................................................................................................................................................................................................................ 26 gg 1.00 0.00 - - - - - - - - - - 1.00 - - - - - - - - - - - - - -
.........................CCCCAGGAGCTCCTGTGTCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 21 1 1.00 1.00 - - - - 1.00 - - - - - - - - - - - - - - - - - - - -
............................................................................................................................................................................................ACTCAGACACCAGTGACTGCTTTGA................................................................................................................................................................................................................................................................................................................................................................................... 25 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - - - - - - - - -