| Gene: Ssh3 | ID: uc008fzo.1_intron_1_0_chr19_4263818_r | SPECIES: mm9 |
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(2) OTHER.mut |
(8) TESTES |
| CACGGCTTCCTGCGCCAGCTACGGACCTACCAGGGCATTCTGACTGCCAGGTATAAGGGGAGGGGACAAGGGCGGTGTTGTGTATACTGAGGGGTGGCTGCTATGTCACTCAAAGCTGACTCACAGCCACCTCCTCACAGCCGGCAGAGCCACGTCTGGGAGCAGAAAGTGGGTGTGGTCTCCCCAGAGG .......................................................................................(((((((((((((....((((........))))...)))))))).)))))..................................................... ...............................................................................80..........................................................140................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................CTCACAGCCACCTCCTCACAGt................................................. | 22 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - |
| ......................................................................................................................ACTCACAGCCACCTCCTCACAt.................................................. | 22 | t | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - |
| .....................CGGACCTACCAGGGCATTCTGACTGCCAG............................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - |
| ....................................................................................TACTGAGGGGTGGCTGCTATGa.................................................................................... | 22 | a | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - |
| CACGGCTTCCTGCGCCAGCTACGGACCTACCAGGGCATTCTGACTGCCAGGTATAAGGGGAGGGGACAAGGGCGGTGTTGTGTATACTGAGGGGTGGCTGCTATGTCACTCAAAGCTGACTCACAGCCACCTCCTCACAGCCGGCAGAGCCACGTCTGGGAGCAGAAAGTGGGTGTGGTCTCCCCAGAGG .......................................................................................(((((((((((((....((((........))))...)))))))).)))))..................................................... ...............................................................................80..........................................................140................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | mjTestesWT2() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......TTCCTGCGCCAGCTACGGACCTACCA.............................................................................................................................................................. | 26 | 1 | 3.00 | 3.00 | 1.00 | - | 2.00 | - | - | - | - | - |
| ...........................................................................................................................................GCCGGCAGAGCCACGTCTGGGAGCA.......................... | 25 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | 1.00 | - | - | - |
| ..CGGCTTCCTGCGCCAGCTACGGACCTA................................................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................CACAGCCACCTCCTCACAGCCGGCAta............................................ | 27 | ta | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - |
| ....GCTTCCTGCGCCAGCTACGGACCTA................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - |
| .......TCCTGCGCCAGCTACGGACCTACCA.............................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 |
| .............GCTACGGACCTACCAggtc.............................................................................................................................................................. | 19 | ggtc | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - |