| Gene: Atp9b | ID: uc008fth.1_intron_5_0_chr18_80949887_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(3) PIWI.ip |
(3) PIWI.mut |
(17) TESTES |
| TGGGGGCAGCTGATGTCTGTGTGTGCACAGGTTCTAGTACAGTCTCCTCTACCTCACCCACACTGTCTGGTGCAGACGGATGGCATGCTGGGCCATGCTAGGGGTCAAGCAGGCACTGCCCTAGTGTCTTAATTCATAATTCATATGAGCTCTAAAACTCGGTGTTGGGTGGTTCTCAGAGATTCTTTGTGGTTCTTCAGGAGGGCAAACAGGCTTCTCTGGCAGCGGACTTCTCCATCACACAGTTCAG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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| ..............................................................................................................................................ATATGAGCTCTAAAACTCGGTGTTGGGTGGTTCTCAGAGATTCTTTGTGGTT........................................................ | 52 | 1 | 135.00 | 135.00 | 135.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TGGCAGCGGACTTCTCCATCACACAG..... | 26 | 1 | 3.00 | 3.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................................................................................................................TCTGGCAGCGGACTTCTCCATCACACA...... | 27 | 1 | 3.00 | 3.00 | - | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................GGCTTCTCTGGCAGCGGACTTCTCCAT............ | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TGGCAGCGGACTTCTCCATCACACAGTTC.. | 29 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TGGCAGCGGACTTCTCCATCACACAGT.... | 27 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................TGGCAGCGGACTTCTCCATCACACAGTT... | 28 | 1 | 2.00 | 2.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................CAAACAGGCTTCTCTGGCAGCGGACTTC................. | 28 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................AAACAGGCTTCTCTGGCAG......................... | 19 | 2 | 1.50 | 1.50 | - | - | - | - | - | - | 1.50 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................AGGCTTCTCTGGCAGCGGACTTCTCC.............. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .........................................................................................................................................................................................................................TCTGGCAGCGGACTTCTCCATC........... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .........................................................................................................................................................................................................................TCTGGCAGCGGACTTCTCCATCACAC....... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................ACAGGCTTCTCTGGCAGCGGACTTC................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................AACAGGCTTCTCTGGCAGCG....................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................................TGCCCTAGTGTCTTAgggt................................................................................................................... | 19 | gggt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..................................................................................................................................................................................................................AGGCTTCTCTGGCAGCGGA..................... | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................ATATGAGCTCTAAAAaaa.......................................................................................... | 18 | aaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .....................................................................................................................................................................TGGGTGGTTCTCAGAGca................................................................... | 18 | ca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| TGGGGGCAGCTGATGTCTGTGTGTGCACAGGTTCTAGTACAGTCTCCTCTACCTCACCCACACTGTCTGGTGCAGACGGATGGCATGCTGGGCCATGCTAGGGGTCAAGCAGGCACTGCCCTAGTGTCTTAATTCATAATTCATATGAGCTCTAAAACTCGGTGTTGGGTGGTTCTCAGAGATTCTTTGTGGTTCTTCAGGAGGGCAAACAGGCTTCTCTGGCAGCGGACTTCTCCATCACACAGTTCAG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
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