| Gene: Ctdp1 | ID: uc008ftb.1_intron_4_0_chr18_80644305_r.3p | SPECIES: mm9 |
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(1) PIWI.mut |
(5) TESTES |
| GAGGACAGGGCCTCAGCTGTCTGCAGGGATGACTTTATGATTAGGAAGTAGTTGAAGAACACAACTACTGTTGACAAGAGGTTCTGTCCTCAGTGGTGAGGAGGGTGTTTGTAAGCCTAGCATGCAGCTCTATCCTAAGAGGAACTTAAGACCCCACTCTGGTACCACATGGCAGGCAGGCTGACATGTTGTCTCTGCAGGTACAGAGAAGGTGCGCCAGGCACAGGAGTGCAAACACCTACATGTGGTC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|
| ......................................................AAGAACACAACTACTGTTGACAAGAGGTTCTGTCCTCAGTGGTGAGGAGGGT................................................................................................................................................ | 52 | 1 | 50.00 | 50.00 | 50.00 | - | - | - | - |
| ....................................................................................................................................................................................CTGACATGTTGTCTCTGCAG.................................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - |
| ................................................................................................................................................................................CAGGCTGACATGTTGTCTCTGCAGGTAC.............................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - |
| .......................................................................................................................................................................................................GGTACAGAGAAGGTGCGCCAGGCA........................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 |
| ........................................................................................................................................................................................CATGTTGTCTCTGCAG.................................................. | 16 | 3 | 0.33 | 0.33 | - | - | 0.33 | - | - |
| .........................................................................................................................................................................TGGCAGGCAGGCTGACA................................................................ | 17 | 3 | 0.33 | 0.33 | - | 0.33 | - | - | - |
| GAGGACAGGGCCTCAGCTGTCTGCAGGGATGACTTTATGATTAGGAAGTAGTTGAAGAACACAACTACTGTTGACAAGAGGTTCTGTCCTCAGTGGTGAGGAGGGTGTTTGTAAGCCTAGCATGCAGCTCTATCCTAAGAGGAACTTAAGACCCCACTCTGGTACCACATGGCAGGCAGGCTGACATGTTGTCTCTGCAGGTACAGAGAAGGTGCGCCAGGCACAGGAGTGCAAACACCTACATGTGGTC |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) |
|---|---|---|---|---|---|---|---|---|---|
| .....................................................GAACACAACTACgag...................................................................................................................................................................................... | 15 | gag | 1.00 | 0.00 | - | - | 1.00 | - | - |