| Gene: Lmnb1 | ID: uc008eyt.1_intron_6_0_chr18_56899696_f.5p | SPECIES: mm9 |
|
|
|
(1) PIWI.mut |
(6) TESTES |
| GACATGGAGATCAGCGCCTACAGGAAGCTCCTGGAAGGCGAAGAAGAGCGGTAAGGGGCTCAGGCGGCTCCAGGCCGGACAGCTGGTTTGTGTTTTCCTGTTATCCCTCCCCCATCTTTCTGGTATATCTATAAAAATATCTCCATTATTTTAGGACTGCTCTAAGTTAAACTTTTCCTTGTGTCTCAGGTATTTGCATCAGAGTAAGATTCTGGTTCACTCAGGTAAAGAACAGCCCAACTAGGACCTG ...............................................................................................................(((......)))...........((((((((....(((...((((.......(((.....))).)))).)))....))))))))....................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT3() Testes Data. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................TCCTGTTATCCCTCCCCCATCTTTCTGGTATATCTATAAAAATATCTCCATT....................................................................................................... | 52 | 1 | 52.00 | 52.00 | 52.00 | - | - | - | - | - |
| ...........................CTCCTGGAAGGCGAAGAAGAGCGG....................................................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - |
| .......................GAAGCTCCTGGAAGGCGAAGAAG............................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - |
| .................................GAAGGCGAAGAAGAGCG........................................................................................................................................................................................................ | 17 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - |
| GACATGGAGATCAGCGCCTACAGGAAGCTCCTGGAAGGCGAAGAAGAGCGGTAAGGGGCTCAGGCGGCTCCAGGCCGGACAGCTGGTTTGTGTTTTCCTGTTATCCCTCCCCCATCTTTCTGGTATATCTATAAAAATATCTCCATTATTTTAGGACTGCTCTAAGTTAAACTTTTCCTTGTGTCTCAGGTATTTGCATCAGAGTAAGATTCTGGTTCACTCAGGTAAAGAACAGCCCAACTAGGACCTG ...............................................................................................................(((......)))...........((((((((....(((...((((.......(((.....))).)))).)))....))))))))....................................................... ....................................................................................................101................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT3() Testes Data. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................................................................................................GAACAGCCCAACgcc......... | 15 | gcc | 1.00 | 0.00 | - | - | - | - | - | 1.00 |
| ..................................................................................................................................................................................................................................GAACAGCCCAACTgcc........ | 16 | gcc | 1.00 | 0.00 | - | - | - | 1.00 | - | - |