| Gene: Aldh7a1 | ID: uc008eyn.1_intron_7_0_chr18_56696953_r.3p | SPECIES: mm9 |
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(1) OTHER.mut |
(1) PIWI.ip |
(12) TESTES |
| ACCCCTCCCCCTTGCTCTGTCATACACTCCTCTAGAGGAGAAGTGTGGCTTTCCCTTCGGACATGCGTCTGTACCACAAATCTCCAGTTTTGGGATGATCCTTCTGATGTTACTGTGTTTTCTGAAGGCAGTGTTTATTACACTGCTTAGAAATGCTTTGCCTACCGCACACTGATGGCGCACATTTGTACTTTGTTAAGCTTTCGAGGACGCGGACCTCAGCTTGGTTGTTCCGTCAGTTCTGTTTGCC ........................................................................................................(((((.(((.((((((((((..((((((((.....))))))))))))))......(((..............)))..))))..)))...))))).................................................... ..............................................................................................95.......................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................CCTTCTGATGTTACTGTGTTTTCTGAAG........................................................................................................................... | 28 | 1 | 5.00 | 5.00 | 3.00 | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CCTTCTGATGTTACTGTGTTTTCTGAAGG.......................................................................................................................... | 29 | 1 | 5.00 | 5.00 | - | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................TCTGATGTTACTGTGTTTTCTGAAGGCAGT...................................................................................................................... | 30 | 1 | 4.00 | 4.00 | - | - | - | 4.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................TCCTTCTGATGTTACTGTGTTTTCTGAAGGC......................................................................................................................... | 31 | 1 | 3.00 | 3.00 | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CCTTCTGATGTTACTGTGTTTTCTGAAGGCA........................................................................................................................ | 31 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .................................................................................................ATCCTTCTGATGTTACTGTGTTTTCTGAAGGC......................................................................................................................... | 32 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................TGTTACTGTGTTTTCTGAA............................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................TCCTTCTGATGTTACTGTGTTTTCTGAAG........................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................TTTCGAGGACGCGGACC................................ | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ......................................................CTTCGGACATGCGTCTGTA................................................................................................................................................................................. | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................CCTTCTGATGTTACTGTGTTTTCTGAAGGC......................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................TCGAGGACGCGGACCTCAGCTTGG....................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................ATTTGTACTTTGTTgtgt................................................. | 18 | gtgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .......................................................................................................................................................................................................GCTTTCGAGGACGCGGACCTCAGC........................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................................................................................................................................TCGAGGACGCGGACCTCAGCTTGGTTGT................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ACCCCTCCCCCTTGCTCTGTCATACACTCCTCTAGAGGAGAAGTGTGGCTTTCCCTTCGGACATGCGTCTGTACCACAAATCTCCAGTTTTGGGATGATCCTTCTGATGTTACTGTGTTTTCTGAAGGCAGTGTTTATTACACTGCTTAGAAATGCTTTGCCTACCGCACACTGATGGCGCACATTTGTACTTTGTTAAGCTTTCGAGGACGCGGACCTCAGCTTGGTTGTTCCGTCAGTTCTGTTTGCC ........................................................................................................(((((.(((.((((((((((..((((((((.....))))))))))))))......(((..............)))..))))..)))...))))).................................................... ..............................................................................................95.......................................................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT1() Testes Data. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509276(GSM509276) small RNA cloning by length. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..........................................................................................................................GGCAGTGTTTATTAgttc.............................................................................................................. | 18 | gttc | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............................................................TGCGTCTGTACCACAAAag.......................................................................................................................................................................... | 19 | ag | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - |