(4)
OTHER.mut
(3)
PIWI.ip
(1)
PIWI.mut
(18)
TESTES

Sense strand
TTGGGTAGCCCAGCTGGGTCATGGCTCCTCCTTTGGCCAACCTGGCCTGGCCGAGATGACCGGAACTCTTCGGGGTAACTGCCCGTGCGTTCTCCATGCCCGTCCCTCCGTCATTGAGCCGGCCACGGGGAGCATCTTGCACCAGGCCCACCGGGACCCTGACTGAACTCTCTCCTTGTTTTTGTCTCCCGCCCCGCCAGAAGGTGATGCTTCCGTCGGGAGCCGCCTTCCGGTGGTTTCAGTGATTTCA
.................................................((.((((((......((((....))))..((.((((((.((((((.(((..((......)).))).)))..))))))))).))))))))))..............................................................................................................
.................................................50..........................................................................................142..........................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR363964(GSM822766)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
.......................................ACCTGGCCTGGCCGAGATGACCGGAACTCTTCGGGGTAACTGCCCGTGCGTT............................................................................................................................................................... 52 1 53.00 53.00 - - 53.00 - - - - - - - - - - - - - - -
..............................................................................................................TCATTGAGCCGGCCACGGGGAGCATCTT................................................................................................................ 28 1 4.00 4.00 - - - - - - 2.00 2.00 - - - - - - - - - -
......................................................GATGACCGGAACTCTTCGGGGTAACTGC........................................................................................................................................................................ 28 1 4.00 4.00 3.00 - - - - - - - - - - - 1.00 - - - - -
...................................................................................................................................................................TGAACTCTCTCCTTGTTTTTGTCTCCC............................................................ 27 1 3.00 3.00 1.00 2.00 - - - - - - - - - - - - - - - -
...............................................TGGCCGAGATGACCGGAACTCTTCGG................................................................................................................................................................................. 26 1 3.00 3.00 2.00 - - - - 1.00 - - - - - - - - - - - -
.....................................................AGATGACCGGAACTCTTCGGGGTAAC........................................................................................................................................................................... 26 1 2.00 2.00 - 1.00 - - - - - - - 1.00 - - - - - - - -
......................................................................................................................................................................................................................GTCGGGAGCCGCCTTCCGG................. 19 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
.........................................CTGGCCTGGCCGAGATGACCGGAACTCT..................................................................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
......................................................GATGACCGGAACTCTTCGGGGTAACTGCCCGT.................................................................................................................................................................... 32 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
...........................................................CCGGAACTCTTCGGGGTAACTGCCCGTG................................................................................................................................................................... 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
.....................................................AGATGACCGGAACTCTTCGGGGTA............................................................................................................................................................................. 24 1 1.00 1.00 - - - - - - - - - - - - - - 1.00 - - -
......................................................GATGACCGGAACTCTTCGGGGTAACTGCC....................................................................................................................................................................... 29 1 1.00 1.00 - - - - - - - - - - 1.00 - - - - - - -
..........................................TGGCCTGGCCGAGATGACCGGAACTCTT.................................................................................................................................................................................... 28 1 1.00 1.00 - - - - - - - - 1.00 - - - - - - - - -
......................................................GATGACCGGAACTCTTCGGGGTAAC........................................................................................................................................................................... 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................TGTCTCCCGCCCCGCCAGAAGGTGATG......................................... 27 1 1.00 1.00 - - - - - - - - - - - 1.00 - - - - - -
.............................................................GGAACTCTTCGGGGTAACTGCCCGTG................................................................................................................................................................... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
............................................................................................TCCATGCCCGTCCCTCCGTCATTGAGC................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
...................................................................................................................................................................TGAACTCTCTCCTTGTTTTTGTCTCC............................................................. 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................TCCGTCATTGAGCCGGCCACG........................................................................................................................... 21 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
.....................................................................................................................................................................................................CAGAAGGTGATGCTTCCGTCagga............................. 24 agga 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - -
..........................................................................................................TCCGTCATTGAGCCGGCCACGGGGAGC..................................................................................................................... 27 1 1.00 1.00 - - - - - - 1.00 - - - - - - - - - - -
..................................................................................................................................................................CTGAACTCTCTCCTTGTTTTTGTCTCC............................................................. 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................................................CCGGGACCCTGACTttcg.................................................................................. 18 ttcg 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - -
.............................................................................................................GTCATTGAGCCGGCCACGGGGAGCA.................................................................................................................... 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - -
..........................................................ACCGGAACTCTTCGGGGTAACTGCCCGTG................................................................................................................................................................... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
.....................................................AGATGACCGGAACTCTTCGGGGTAA............................................................................................................................................................................ 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
..................................................................................................................TGAGCCGGCCACGGGGAGCATCTTGCAac........................................................................................................... 29 ac 1.00 0.00 - - - 1.00 - - - - - - - - - - - - - -
..............................................................................................................TCATTGAGCCGGCCACGGGGAGCATC.................................................................................................................. 26 1 1.00 1.00 - - - - - - - - - - - - - - - 1.00 - -
................................................................................................................................................................................TGTTTTTGTCTCCCGCCCCGCCAGAAG............................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
..........................................TGGCCTGGCCGAGATGACCGGAACTCa..................................................................................................................................................................................... 27 a 1.00 0.00 1.00 - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................TCTCCTTGTTTTTGTCTCCCGCCCCGC..................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
.....................................................AGATGACCGGAACTCTTCGGGGTAACT.......................................................................................................................................................................... 27 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................TGATGCTTCCGTCGGGAGCCGCCT...................... 24 1 1.00 1.00 - - - - - - - - - - - - - - - - 1.00 -
.......................................................................................................CCCTCCGTCATTGAGCCGGCCACGGGG........................................................................................................................ 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -

Antisense strand
TTGGGTAGCCCAGCTGGGTCATGGCTCCTCCTTTGGCCAACCTGGCCTGGCCGAGATGACCGGAACTCTTCGGGGTAACTGCCCGTGCGTTCTCCATGCCCGTCCCTCCGTCATTGAGCCGGCCACGGGGAGCATCTTGCACCAGGCCCACCGGGACCCTGACTGAACTCTCTCCTTGTTTTTGTCTCCCGCCCCGCCAGAAGGTGATGCTTCCGTCGGGAGCCGCCTTCCGGTGGTTTCAGTGATTTCA
.................................................((.((((((......((((....))))..((.((((((.((((((.(((..((......)).))).)))..))))))))).))))))))))..............................................................................................................
.................................................50..........................................................................................142..........................................................................................................
Size Perfect hit Total Norm Perfect Norm SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR363964(GSM822766)
AdultGlobal 5'-RACEread_length: 105. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR014235(GSM319959)
2 dpp total. (testes)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
................................................................................................................................................................................................................................GCCTTCCGGTGGTTTCAGTGATTTCA 26 1 138.00 138.00 79.00 57.00 - - 2.00 - - - - - - - - - - - - -
...............................................................................................................................................................................................................................CGCCTTCCGGTGGTTTCAGTGATTTCA 27 1 94.00 94.00 71.00 21.00 - - 1.00 1.00 - - - - - - - - - - - -
............................................................................................................................................................................................................................AGCCGCCTTCCGGTGGTTTCAGTGATTTCA 30 1 17.00 17.00 11.00 6.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................GAGCCGCCTTCCGGTGGTTTCAGTGATTTCA 31 1 11.00 11.00 7.00 3.00 - - - - - - - - - - - - - - - 1.00
.............................................................................................................................................................................................................................GCCGCCTTCCGGTGGTTTCAGTGATTTCA 29 1 11.00 11.00 8.00 3.00 - - - - - - - - - - - - - - - -
.................................................................................................................................................................................GTTTTTGTCTCCCGCCCCGCCAGA................................................. 24 1 10.00 10.00 6.00 3.00 - 1.00 - - - - - - - - - - - - - -
........................................................................................GTTCTCCATGCCCGTCCCTCCGTCA......................................................................................................................................... 25 1 8.00 8.00 4.00 4.00 - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................CCGCCTTCCGGTGGTTTCAGTGATTTCA 28 1 6.00 6.00 1.00 5.00 - - - - - - - - - - - - - - - -
..............................................................................................................................................................................................................................CGCCTTCCGGTGGTTTCAGTGATTTCAt 28 t 5.00 0.00 2.00 2.00 - - 1.00 - - - - - - - - - - - - -
..................................................................................................................................................................................................................................CTTCCGGTGGTTTCAGTGATTTCA 24 1 4.00 4.00 1.00 3.00 - - - - - - - - - - - - - - - -
................................................................................................................................................................................TGTTTTTGTCTCCCGCCCCGCCAGA................................................. 25 1 3.00 3.00 2.00 1.00 - - - - - - - - - - - - - - - -
...............................................................................................................................................................................TTGTTTTTGTCTCCCGCCCCGCCAGA................................................. 26 1 3.00 3.00 2.00 1.00 - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................GTCGGGAGCCGCCTTCCGGTGGTTTCA......... 27 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - - - - - -
...................................................................................................................................................................................TTTTGTCTCCCGCCCCGCCAGA................................................. 22 1 2.00 2.00 - 2.00 - - - - - - - - - - - - - - - -
.......................................................................................................................................................................................................................TCGGGAGCCGCCTTCCGGTGGTTTCA......... 26 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - -
.............................................................................................................................................................................CCTTGTTTTTGTCTCCCGCCCCGCCA................................................... 26 1 2.00 2.00 2.00 - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................................................................CCTTCCGGTGGTTTCAGTGATTTCA 25 1 2.00 2.00 1.00 - - 1.00 - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................GAGCCGCCTTCCGGTGGTTTCAGTGATTT.. 29 1 2.00 2.00 1.00 1.00 - - - - - - - - - - - - - - - -
...........................................................................................CTCCATGCCCGTCCCTCCGTCA......................................................................................................................................... 22 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................TTTTTGTCTCCCGCCCCGCCAGAtat................................................. 26 tat 1.00 0.00 - - - - 1.00 - - - - - - - - - - - - -
............................................................................................TCCATGCCCGTCCCTCCGTCATTGA..................................................................................................................................... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................GAGCCGCCTTCCGGTGGTTTCA......... 22 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................GCCGCCTTCCGGTGGTTTCAGTGATTTC. 28 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................AGCCGCCTTCCGGTGGTTTCAGTGATTTCAa 31 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................CCGCCTTCCGGTGGTTTCAGTGATTTCAg 29 g 1.00 0.00 1.00 - - - - - - - - - - - - - - - - -
..............................................................................................................................................................................CTTGTTTTTGTCTCCCGCCCCGCCAGA................................................. 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
.....................................................................................................GTCCCTCCGTCATTGAGCCGGCCACG........................................................................................................................... 26 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................CCTTCCGGTGGTTTCAGTGATTTCAgggc 29 gggc 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................GAGCCGCCTTCCGGTGGTTTCAGTGA..... 26 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
...................................................................................................................................................CACCGGGACCCTGACTGAACTCTCTCt............................................................................ 27 t 1.00 0.00 1.00 - - - - - - - - - - - - - - - - -
..................................................................................................................................................................................TTTTTGTCTCCCGCCCCGCCA................................................... 21 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
...........................................................................................................................................................ACCCTGACTGAACTCTCTCCTT......................................................................... 22 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................CCTTCCGGTGGTTTCAGTGATTTCAaggc 29 aggc 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - -
......................................................................................CGTTCTCCATGCCCGTCCCTCCGTCAa......................................................................................................................................... 27 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - -
..............................................................................................................................................................................TTGTTTTTGTCTCCCGCCCCGCCAGAa................................................. 27 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - -
..................................................................................................................................................................................TTTTTGTCTCCCGCCCCGCCAGA................................................. 23 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
................................................................................................................................................................................TTTTTGTCTCCCGCCCCGCCAGAaa................................................. 25 aa 1.00 0.00 1.00 - - - - - - - - - - - - - - - - -
.................................................................................................................................................................................TTTTTGTCTCCCGCCCCGCCAGAa................................................. 24 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - -
........................................................................................................................................................................................................................CGGGAGCCGCCTTCCGGTGGTTTCA......... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................GCCGCCTTCCGGTGGTTTCAGTGATTTCAc 30 c 1.00 0.00 1.00 - - - - - - - - - - - - - - - - -
........................................................................GGGTAACTGCCCGTGCGTTCTCCA.......................................................................................................................................................... 24 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
................................................................................................................................................................GACTGAACTCTCTCCTTGTTTTTGTC................................................................ 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
......................................................................................CGTTCTCCATGCCCGTCCCTCCGTCAt......................................................................................................................................... 27 t 1.00 0.00 - - - - - 1.00 - - - - - - - - - - - -
.................................................................................................................................................................................GTTTTTGTCTCCCGCCCCGCCAGAA................................................ 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................CCGTCGGGAGCCGCCTTCCGGTGGTTTCA......... 29 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
.......................................................................................GTTCTCCATGCCCGTCCCTCCGTCAa......................................................................................................................................... 26 a 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - -
................................................................................................................................................................................................................................TCCGGTGGTTTCAGTGATTTCAcggc 26 cggc 1.00 0.00 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................................................GTCGGGAGCCGCCTTCCGGTGGTTTCAGT....... 29 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
......................................................................................................................................................................................TGTCTCCCGCCCCGCCAGAAGGTGA........................................... 25 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
................................................................................CCCGTGCGTTCTCCATGCCCGTCCCa................................................................................................................................................ 26 a 1.00 0.00 1.00 - - - - - - - - - - - - - - - - -
...........................................................................................................CCGTCATTGAGCCGGCCACGGGGAGCA.................................................................................................................... 27 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - -
.................GTCATGGCTCCTCCTTTGGCCAACCTG.............................................................................................................................................................................................................. 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
..............................................................................................................................................................CTGACTGAACTCTCTCCTTGTTT..................................................................... 23 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................................................GGAGCCGCCTTCCGGTGGTTTCAGT....... 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
.......................................................................................CGTTCTCCATGCCCGTCCCTCCGTCA......................................................................................................................................... 26 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
............................................................................................................................................................................................................................AGCCGCCTTCCGGTGGTTTCAGTGATT... 27 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
........................................................................................................................................................................TCTCCTTGTTTTTGTCTCCCGCCCCGCCAaa................................................... 31 aa 1.00 0.00 1.00 - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................CTTCCGGTGGTTTCAGTGATTTCAtcg 27 tcg 1.00 0.00 - 1.00 - - - - - - - - - - - - - - - -
....................................................................................................................................................................................TTTGTCTCCCGCCCCGCCAGA................................................. 21 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
............................................................................................................................................................CCCTGACTGAACTCTCTCCTTGTT...................................................................... 24 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
.................................................................................................................................................................ACTGAACTCTCTCCTTGTTTTTGTC................................................................ 25 1 1.00 1.00 - 1.00 - - - - - - - - - - - - - - - -
.........................................................................GGTAACTGCCCGTGCGTTCTCCA.......................................................................................................................................................... 23 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
........................................................................................................................................................................................TCTCCCGCCCCGCCAGAAGGTGA........................................... 23 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
........................................................................................TTCTCCATGCCCGTCCCTCCGTCAa......................................................................................................................................... 25 a 1.00 0.00 1.00 - - - - - - - - - - - - - - - - -
......................................................................................................................................................................................TGTCTCCCGCCCCGCCAGAAGGTG............................................ 24 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
....................................................................................................................................................................................................................................TCCGGTGGTTTCAGTGATTTCA 22 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
...............................................................................................................................................................................................................................GCCTTCCGGTGGTTTCAGTGATTTCAa 27 a 1.00 0.00 1.00 - - - - - - - - - - - - - - - - -
.......................................................................................................................CGGCCACGGGGAGCATCTTGCACCA.......................................................................................................... 25 1 1.00 1.00 - - - 1.00 - - - - - - - - - - - - - -
.............................................................................................................................................................................................................................CGCCTTCCGGTGGTTTCAGTGATTTCAtc 29 tc 1.00 0.00 1.00 - - - - - - - - - - - - - - - - -
...........................................................................................................................................................................................................................GAGCCGCCTTCCGGTGGTTTCAGTGATT... 28 1 1.00 1.00 1.00 - - - - - - - - - - - - - - - - -
..........................................................................................................................................................................................TCCCGCCCCGCCAGA................................................. 15 2 0.50 0.50 0.50 - - - - - - - - - - - - - - - - -