| Gene: 2610024E20Rik | ID: uc008eko.1_intron_9_0_chr18_34617529_r.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(15) TESTES |
| TGCTTTTGTTAGTGGGTTTAGGCGTATAAGCAGTATCTCTTAGTGAACGAATATGAAGAATGTAGAAGCAGCAGGCGGCAGTATAAATATGCTAGTATTTCTTGCTCTGATGTTTTCCCCTGCTATGTATAAAATGAACCCACTATACAATTATATAGGCTCAAGTCACCCTTAGTGTTATCCTTGTGTTTGTTTCACAGAGCCGTTTCCTGCATTTAAGTCTTGGCAGGAAGACTGTGAGTCTGGAGAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | mjTestesWT3() Testes Data. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................AAGCAGCAGGCGGCAGTATAAATATGCTAGTATTTCTTGCTCTGATGTTTTC..................................................................................................................................... | 52 | 1 | 66.00 | 66.00 | 66.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................CGAATATGAAGAATGTAGAAGCAGCAGGCG............................................................................................................................................................................. | 30 | 1 | 11.00 | 11.00 | - | 11.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TGGCAGGAAGACTGTGAGTCTGG.... | 23 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................TGGCAGGAAGACTGTGAGTCTGGAGA. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................AATGTAGAAGCAGCAGGCGGCAGTATAAATAT................................................................................................................................................................ | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................TAAGTCTTGGCAGGAAGACTGTGAtt........ | 26 | tt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...................................................................................................................................................................................................................GCATTTAAGTCTTGGCAGGAAGA................ | 23 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGCATTTAAGTCTTGGCAGGAAGACTGTGA.......... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .......................................................AAGAATGTAGAAGCAGCAGG............................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................................................................................................................TGGCAGGAAGACTGTGAGTCTGGAG.. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................TTGGCAGGAAGACTGTGAGTCTGGAGA. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................TGAACGAATATGAAGAAcgc........................................................................................................................................................................................... | 20 | cgc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................................................................................................................................................GGAAGACTGTGAGTCggta... | 19 | ggta | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ........................................................................................ATGCTAGTATTTCTTGCTCTGATGTTT....................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGCATTTAAGTCTTGGCAGGAAGACTGTG........... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..........................................................................................................................................................................................................................................CTGTGAGTCTGGAGAA | 16 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | 0.12 | - | - | - | - | - | - | - | - |
| TGCTTTTGTTAGTGGGTTTAGGCGTATAAGCAGTATCTCTTAGTGAACGAATATGAAGAATGTAGAAGCAGCAGGCGGCAGTATAAATATGCTAGTATTTCTTGCTCTGATGTTTTCCCCTGCTATGTATAAAATGAACCCACTATACAATTATATAGGCTCAAGTCACCCTTAGTGTTATCCTTGTGTTTGTTTCACAGAGCCGTTTCCTGCATTTAAGTCTTGGCAGGAAGACTGTGAGTCTGGAGAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | mjTestesWT3() Testes Data. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR363956(GSM822758) P14-WTSmall RNA Miwi IPread_length: 36. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................TTCACAGAGCCGTTTCCT....................................... | 18 | 1 | 2.00 | 2.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................CAAGTCACCCTTAGgaac........................................................................... | 18 | gaac | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |