| Gene: Usp14 | ID: uc008ean.1_intron_1_0_chr18_9997279_r | SPECIES: mm9 |
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(2) OTHER.mut |
(2) PIWI.ip |
(2) PIWI.mut |
(17) TESTES |
| GAATAGTCCTCCGAAAGAGATTAAGTATGAACCCTTTTCATTTGCTGACGGTAAGTGGATGTCTCAGTTTGATTGTATACATTTAAGTTAGATTGCATGTTCTACCATTTATCTTTTTAATCATATACCTTGCACTCTTCACGCTATCTTTCTTCTTTGGCTCACTCAGTAGTCCAGAATGGTCTGGAATTCCCCATGTAGCTAACGGTGGTCTTAAGGTTATTTGTACTCTACCCTAGCTTCCCAAGAATTGGTGTGACAGATATAAGCCACCATCCCTGGTCTAAAGTTAGGCTTTTTGAAAAATAATGTCCTTAATATAACTTAAATAAAGTACTTTAGACCTAATTGTAGCTCTGCACAGTAATATGTAATGGAGTCCAGTAAAGCAGTGTTTCTCTAGTCTTAACTTGATAATTGTTACTTTGACTGAGCACAGCACATGTCTATTTGTTGCCTGTTTTAATTGAATCCCTTCTCTTTAAGATATTGGCTCCAATAATTGTGGCTACTATGACTTACAAGCAGTGTTAACT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAAGTGGATGTCTCAGTTTGATTGTATACATTTAAGTTAGATTGCATGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................. | 52 | 1 | 50.00 | 50.00 | 50.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................GTGTGACAGATATAAGC.......................................................................................................................................................................................................................................................................... | 17 | 2 | 2.50 | 2.50 | - | 2.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................AGATTAAGTATGAACCCTTTTCAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTGAATCCCTTCTCTTTAAG.................................................. | 24 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................AAGTATGAACCCTTTTCATTTGCTGACGt..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 29 | t | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................ATTTGCTGACGGTAAGTGGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............AGAGATTAAGTATGAACCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTGTGGCTACTATGACTTACAAGCA......... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TGGTCTGGAATTCCCCATGTAGCTAACGG........................................................................................................................................................................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGCTACTATGACTTACAAGC.......... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .................AGATTAAGTATGAACCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................................................................................................................................................................................................................................TGTGACAGATATAActga........................................................................................................................................................................................................................................................................ | 18 | ctga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .............AAAGAGATTAAGTATGAACCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGTGGCTACTATGA................... | 19 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCTACTATGACTTACAAGCAGTG...... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................AAGTATGAACCCTTTTCATTTGCTGACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAATTGAATCCCTTCTCTTTAAG.................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...............AGAGATTAAGTATGAACCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGCTACTATGACTTACAAGCAG........ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GAATAGTCCTCCGAAAGAGATTAAGTATGAACCCTTTTCATTTGCTGACGGTAAGTGGATGTCTCAGTTTGATTGTATACATTTAAGTTAGATTGCATGTTCTACCATTTATCTTTTTAATCATATACCTTGCACTCTTCACGCTATCTTTCTTCTTTGGCTCACTCAGTAGTCCAGAATGGTCTGGAATTCCCCATGTAGCTAACGGTGGTCTTAAGGTTATTTGTACTCTACCCTAGCTTCCCAAGAATTGGTGTGACAGATATAAGCCACCATCCCTGGTCTAAAGTTAGGCTTTTTGAAAAATAATGTCCTTAATATAACTTAAATAAAGTACTTTAGACCTAATTGTAGCTCTGCACAGTAATATGTAATGGAGTCCAGTAAAGCAGTGTTTCTCTAGTCTTAACTTGATAATTGTTACTTTGACTGAGCACAGCACATGTCTATTTGTTGCCTGTTTTAATTGAATCCCTTCTCTTTAAGATATTGGCTCCAATAATTGTGGCTACTATGACTTACAAGCAGTGTTAACT |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029041(GSM433293) 6w_homo_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................GCACTCTTCACGCTcaaa....................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | caaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...............................................................................................................................GCACTCTTCACGCTccaa....................................................................................................................................................................................................................................................................................................................................................................................................... | 18 | ccaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |