| Gene: Dhx57 | ID: uc008dqx.1_intron_0_0_chr17_80638271_r.5p | SPECIES: mm9 |
|
|
|
(3) PIWI.ip |
(2) PIWI.mut |
(9) TESTES |
| TCGTCTCCTTGGATGACGGCTGGATCCGGTTTGTGGCCGCCTCCCACCAGGTAAAGGGACAGCTGATCTGCTTAAAGGCTCGGGTCATGAGCTGCTCTGGAATATGAAATGAACAACATTCTTTCAGGACCAAGACAACAGAACTAATGGGCAGGAAGCGTGAAAGCAACATGAGGCAGAGAAGGGCCTAATAATAGTGTGAGGAAGCAGCGCAGTAGCGACCCCTGGCTGGGTTAGAACTGCTACAGAG ....................................................................................(((((..(((((((((....(((((.(((.....))))))))...)))................))))))....)))))....................................................................................... ..................................................................................83................................................................................165................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................TGAGCTGCTCTGGAATATGAAATGAAC........................................................................................................................................ | 27 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - |
| .......................................................................................................................................CAACAGAACTAATGGGCAGGAAGCGT......................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - |
| ..........................................................................................................................TTCAGGACCAAGACAACAGAACTAATGG.................................................................................................... | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................GACAACAGAACTAATGGGCAGGAAGCGT......................................................................................... | 28 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - |
| ..............................................................................................................................................ACTAATGGGCAGGAAGCGTGAAAGCAAC................................................................................ | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................GTAAAGGGACAGCTGATCTGCTTA................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - |
| ...................................................................................................................................................TGGGCAGGAAGCGTGAAAGCAACATGAG........................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| .........................................................................................................................................ACAGAACTAATGGGCAGGAAGCGTGA....................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................AGACAACAGAACTAATGGGCAGGAAGC........................................................................................... | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................AAGACAACAGAACTAATGGGCAGGAAGC........................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................CAGGACCAAGACAACAGAACTAATGGGC.................................................................................................. | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TGGGCAGGAAGCGTGAAAGCAACATGA............................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| .................................................GGTAAAGGGACAGCTGATCTGCTTAAAGGC........................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| ................................................................................................................................................TAATGGGCAGGAAGCGTGAAAGCAAC................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ........TTGGATGACGGCTGGATCCGGTTTG......................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| .........................................................................................................................TTTCAGGACCAAGACAACAGAAC.......................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - |
| .....TCCTTGGATGACGGCTGGATCCGGTT........................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................TAGTGTGAGGAAGCAGCGCAGTAGCGAC............................ | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................ACAACAGAACTAATGGGCAGGAAGCGT......................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................TGGGCAGGAAGCGTGAAAGCAACATG............................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................AGACAACAGAACTAATGGGCAGGAAGCGT......................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - |
| .........................................TCCCACCAGGTAAAGGGACAGCTGATC...................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................TTCTTTCAGGACCAAGACAACAGAAC.......................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| .....TCCTTGGATGACGGCTGGATCCGGT............................................................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| TCGTCTCCTTGGATGACGGCTGGATCCGGTTTGTGGCCGCCTCCCACCAGGTAAAGGGACAGCTGATCTGCTTAAAGGCTCGGGTCATGAGCTGCTCTGGAATATGAAATGAACAACATTCTTTCAGGACCAAGACAACAGAACTAATGGGCAGGAAGCGTGAAAGCAACATGAGGCAGAGAAGGGCCTAATAATAGTGTGAGGAAGCAGCGCAGTAGCGACCCCTGGCTGGGTTAGAACTGCTACAGAG ....................................................................................(((((..(((((((((....(((((.(((.....))))))))...)))................))))))....)))))....................................................................................... ..................................................................................83................................................................................165................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR363959(GSM822761) AdultSmall RNA Miwi IPread_length: 36. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR037901(GSM510437) testes_rep2. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................GTTTGTGGCCGCCTaact................................................................................................................................................................................................................ | 18 | aact | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 |
| .......CTTGGATGACGGCTGGATCCGGTTTGTGGC..................................................................................................................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - |