| Gene: 1110012J17Rik | ID: uc008djv.1_intron_0_0_chr17_66687495_r.5p | SPECIES: mm9 |
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(1) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(17) TESTES |
| CTGTCTTACTAACTGCCCCCTGGGGACTCTAGCCCTGCCTGCCTCACACTGTAAGTGCTTCTTCCCCACCTCCACCCGTCCACAGAGCTGTGTGTGTAGCTGATGTACTCGTGGTTGGCATTCGGCATCCATCCTCATCTGTGGACGTCCACTCTCACCCCCAAGGGACAGACGCTGAGCTCAGACATCCCATTTTGCCCACCTCCAGGGTGGACTACTTAGGATCTAGATTCTGCTAAAGTTTCTCCTC ..................................................................................................((..((.........))..)).((((((.((...........((((....)))).....(((....)))...)).))))))....................................................................... ..................................................................................................99...................................................................................184................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesWT3() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................TGTACTCGTGGTTGGCATTCGGCATC......................................................................................................................... | 26 | 1 | 20.00 | 20.00 | 9.00 | 5.00 | 2.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TGATGTACTCGTGGTTGGCATTCGGC............................................................................................................................ | 26 | 1 | 17.00 | 17.00 | 8.00 | 4.00 | 4.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .......................................................................................................TGTACTCGTGGTTGGCATTCGGCAT.......................................................................................................................... | 25 | 1 | 12.00 | 12.00 | - | - | 7.00 | 1.00 | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................TAGCTGATGTACTCGTGGTTGGCATT................................................................................................................................ | 26 | 1 | 9.00 | 9.00 | 3.00 | 5.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGTAGCTGATGTACTCGTGGTTGGCAT................................................................................................................................. | 27 | 1 | 5.00 | 5.00 | - | 3.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................................................TCTCACCCCCAAGGGACAGACGCTGAGC...................................................................... | 28 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................TCTCACCCCCAAGGGACAGACGCTGA........................................................................ | 26 | 1 | 3.00 | 3.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................TCTCACCCCCAAGGGACAGACGCTGAtt...................................................................... | 28 | tt | 2.00 | 3.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................ATGTACTCGTGGTTGGCATTCGGCATC......................................................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGTAGCTGATGTACTCGTGGTTGGCATT................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................TAGCCCTGCCTGCCTCACACTGTAAGT.................................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................TGGCATTCGGCATCCATCCTCATCTGT............................................................................................................ | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................................CAAGGGACAGACGCTGAGCTCAGACt............................................................... | 26 | t | 2.00 | 0.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................TGTACTCGTGGTTGGCATTCGGCA........................................................................................................................... | 24 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................TGTAGCTGATGTACTCGTGGTTGGCAa................................................................................................................................. | 27 | a | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................TACTTAGGATCTAGATTCTGCTAAAG......... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................TGGCATTCGGCATCCATCCTCATCTGTa........................................................................................................... | 28 | a | 1.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................ACAGACGCTGAGCTCAGACATCCCATT........................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................TCCACCCGTCCACAGAGCTGTGTGTG.......................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................CCACAGAGCTGTGTGTGTAGCTGATG................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................TGTGTGTAGCTGATGTACTCGTGGTTGGC................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................TGTGTAGCTGATGTACTCGTGGTTG..................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................TCTCACCCCCAAGGGACAGACGCTGAGCT..................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................TCCTCATCTGTGGACGTCCACTCTCA............................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................TCCACAGAGCTGTGTGTGTAGCTGATGT................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................TGCCTGCCTCACACTGTAAGTGCTTC............................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ...........................................................................................GTGTGTAGCTGATGTACTCGTGGTTGGC................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TGATGTACTCGTGGTTGGCATTCGGCt........................................................................................................................... | 27 | t | 1.00 | 17.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................ATGTACTCGTGGTTGGCATTCGGCAT.......................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................AGCTGTGTGTGTAGCTGATGTACTCG........................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................TGATGTACTCGTGGTTGGCATTCGGCct.......................................................................................................................... | 28 | ct | 1.00 | 17.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................TGATGTACTCGTGGTTGGCATTCGG............................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......TACTAACTGCCCCCTGGGGA................................................................................................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................TGTACTCGTGGTTGGCATTCGGCATa......................................................................................................................... | 26 | a | 1.00 | 12.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................CTCACACTGTAAGTGCTTCTTCCCCACC.................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .................................................................................................................................................................................................................GTGGACTACTTAGGATCTAGATTCT................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..........................................................................................................................................................TCACCCCCAAGGGACAGACGCTGAGC...................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................TGTAAGTGCTTCTTCCCCACCTCCA................................................................................................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................CTGATGTACTCGTGGTTGGCATTCGG............................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................GTGTAGCTGATGTACTCGTGGTTGGCA.................................................................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CTGTCTTACTAACTGCCCCCTGGGGACTCTAGCCCTGCCTGCCTCACACTGTAAGTGCTTCTTCCCCACCTCCACCCGTCCACAGAGCTGTGTGTGTAGCTGATGTACTCGTGGTTGGCATTCGGCATCCATCCTCATCTGTGGACGTCCACTCTCACCCCCAAGGGACAGACGCTGAGCTCAGACATCCCATTTTGCCCACCTCCAGGGTGGACTACTTAGGATCTAGATTCTGCTAAAGTTTCTCCTC ..................................................................................................((..((.........))..)).((((((.((...........((((....)))).....(((....)))...)).))))))....................................................................... ..................................................................................................99...................................................................................184................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesWT3() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................................................................................GAGCTGTGTGTGTAcaaa........................................................................................................................................................ | 18 | caaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..................................CTGCCTGCCTCACACT........................................................................................................................................................................................................ | 16 | 6 | 0.17 | 0.17 | - | - | - | - | - | - | - | - | - | - | - | 0.17 | - | - | - | - | - |
| .........................................................................................................................................................................................................................................TGCTAAAGTTTCTCC.. | 15 | 11 | 0.09 | 0.09 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.09 |