| Gene: Ppp4r1 | ID: uc008dgj.1_intron_7_0_chr17_66163094_f.5p | SPECIES: mm9 |
|
|
|
(1) OTHER.mut |
(3) PIWI.ip |
(1) PIWI.mut |
(14) TESTES |
| TTGGAGATATTTGCAGTGTAGTTGGCCAACAAGCAACAGAAGAAATGTTGGTAAGTATCTAAGGTATTAAAGAATAAGCAATACAGAGTAATAGAGTTTATTAATATGCCCCCGTGACTGCAAACCAGAATGATGTTTGTACATTTGGAACTACAAGTTGGTGTTTGCAAGGCGTTCTGATAAGGATTGCTTCTTTAAGCATTAAACAGTGGTTCCCTGTTAGCCTCCCACTTGTACATAGTGACTCAGT ..................................................(((((((((...(((((.....(((((((..((........))..)))))))...))))).(((....(((((((.........)))))))....)))...........))))))))).................................................................................. ..................................................51........................................................................................................................173........................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................GTAAGTATCTAAGGTATTAAAGAATAAGCAATACAGAGTAATAGAGTTTATT.................................................................................................................................................... | 52 | 1 | 64.00 | 64.00 | 32.00 | 32.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .TGGAGATATTTGCAGTGTAGTTGGCCA.............................................................................................................................................................................................................................. | 27 | 1 | 7.00 | 7.00 | - | - | 1.00 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | 1.00 | - | - |
| .TGGAGATATTTGCAGTGTAGTTGGCC............................................................................................................................................................................................................................... | 26 | 1 | 4.00 | 4.00 | - | - | 1.00 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................................TTTGGAACTACAAGTTGGT........................................................................................ | 19 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ..........TTGCAGTGTAGTTGGCCAACAAGCAACA.................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................ATTTGGAACTACAAGTTGGTGTTTGCA................................................................................. | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .TGGAGATATTTGCAGTGTAGTTGacc............................................................................................................................................................................................................................... | 26 | acc | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......TATTTGCAGTGTAGTTGGCCAACAA.......................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .TGGAGATATTTGCAGTGTAGTTGGa................................................................................................................................................................................................................................ | 25 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...................................ACAGAAGAAATGTTGGaa..................................................................................................................................................................................................... | 18 | aa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| TTGGAGATATTTGCAGTGTAGTTGGCCAACAAGCAACAGAAGAAATGTTGGTAAGTATCTAAGGTATTAAAGAATAAGCAATACAGAGTAATAGAGTTTATTAATATGCCCCCGTGACTGCAAACCAGAATGATGTTTGTACATTTGGAACTACAAGTTGGTGTTTGCAAGGCGTTCTGATAAGGATTGCTTCTTTAAGCATTAAACAGTGGTTCCCTGTTAGCCTCCCACTTGTACATAGTGACTCAGT ..................................................(((((((((...(((((.....(((((((..((........))..)))))))...))))).(((....(((((((.........)))))))....)))...........))))))))).................................................................................. ..................................................51........................................................................................................................173........................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR363963(GSM822765) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR363964(GSM822766) AdultGlobal 5'-RACEread_length: 105. (testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesWT3() Testes Data. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) |
|---|