| Gene: Mpnd | ID: uc008dap.1_intron_4_0_chr17_56151123_f | SPECIES: mm9 |
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(4) OTHER.mut |
(1) PIWI.ip |
(1) PIWI.mut |
(11) TESTES |
| GTGCCAGTGCCCATCCGTTACTGCATGCTGGGCAGCCGAGACTCCGCCAGGTCAGTTACATCATCTGCCCTGGTCCTGGCTTCCCTGGAATCCTTGGTTGGTTTGATCCAGCAAAGGCAGGGCCTGGAGTCCTTGGCTGCTGAGAGTACTCAGGACGGGTGGAGGTGGGAAAGAGCCTGAGTTCCTAAAGCCCTGGGACCCTCCTGACTACTCCAGGAACCCCCACACTCTGGTAGAAGTAACATCCTTTGCTGCCATCAACAAGT ....................................................................................................................(((((((.....)))))..))..(((.(((((.((((((.((((((...((((((..........))))))...)).....)))))))))).)))))))).................................................. ....................................................................................................................117................................................................................................216................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................................................TGAGAGTACTCAGGACGGGTGGA....................................................................................................... | 23 | 1 | 7.00 | 7.00 | 1.00 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................CCACACTCTGGTAGAAGTAA........................ | 20 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................GCTGGGCAGCCGAGACTCCGCCAGG....................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .............................................................................................................................................GAGAGTACTCAGGACGGGTGGAa...................................................................................................... | 23 | a | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................................................................CAGGAACCCCCACACTCTGGTAGAAGT.......................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................TACTGCATGCTGGGCAGCCGAGACTCCGC........................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................CTTGGCTGCTGAGAGagt..................................................................................................................... | 18 | agt | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................................................................................................................................................................................................ACACTCTGGTAGAAGTAACATCCTTTGC.............. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................................GAGAGTACTCAGGACGGGTGGA....................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| GTGCCAGTGCCCATCCGTTACTGCATGCTGGGCAGCCGAGACTCCGCCAGGTCAGTTACATCATCTGCCCTGGTCCTGGCTTCCCTGGAATCCTTGGTTGGTTTGATCCAGCAAAGGCAGGGCCTGGAGTCCTTGGCTGCTGAGAGTACTCAGGACGGGTGGAGGTGGGAAAGAGCCTGAGTTCCTAAAGCCCTGGGACCCTCCTGACTACTCCAGGAACCCCCACACTCTGGTAGAAGTAACATCCTTTGCTGCCATCAACAAGT ....................................................................................................................(((((((.....)))))..))..(((.(((((.((((((.((((((...((((((..........))))))...)).....)))))))))).)))))))).................................................. ....................................................................................................................117................................................................................................216................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesKO8() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesWT3() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................CCTGAGTTCCTAAAGC........................................................................... | 16 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | 0.33 |