| Gene: Pex6 | ID: uc008cud.1_intron_11_0_chr17_46860685_f | SPECIES: mm9 |
|
|
|
(3) OTHER.mut |
(1) OVARY |
(4) PIWI.ip |
(1) PIWI.mut |
(1) TDRD1.ip |
(20) TESTES |
| GGAGCTCATCAACATGTATGTGGGCCAAAGCGAGGAGAATGTCCGGGAAGGTGAGTGAGTGAGCGGGGAGAGCGAGCGAGTCTCGGGCCCTTCCCCAACACCATCTTCCCCAGTGGCTGCTCCTGGTCAGCTCAGTGGGCAATGGCCGGGGAGGAACTGTCGGGCACATGTGCCATCCTTCTCCCCTGACTTGAAGCTCCTTGACACCACTCTCCTGCGAGCCTCTTTCTCAGTGTTTGCCAGGGCCAGGGCTGCTGCTCCCTGTATCATCTTCTTTGATGAA ...................................................................((.((((((.....))))....(((((((....((((....((((.((((((((...)).)))).)).))))..))))..)))))))..)).)).((((....))))............................................................................................................. ...................................................................68........................................................................................................174........................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesWT2() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................GGAACTGTCGGGCACATG................................................................................................................. | 18 | 1 | 7.00 | 7.00 | - | 4.00 | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................GGAACTGTCGGGCACATGTGCCATCCTT....................................................................................................... | 28 | 1 | 5.00 | 5.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .....................................................................................................................................................................ACATGTGCCATCCTTCTCCCCTGACT............................................................................................ | 26 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........ACATGTATGTGGGCCAAAGCGAGGAG...................................................................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................GGAACTGTCGGGCACATGTGC.............................................................................................................. | 21 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................ACATGTGCCATCCTTCTCCCCTGACTT........................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................TGTGCCATCCTTCTCCCCTGACTTGAAGC...................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................GCAATGGCCGGGGAGGAACTGTCGGGCA..................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................AACTGTCGGGCACATGTGCCATC.......................................................................................................... | 23 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................AACTGTCGGGCACATGTGCCA............................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................ATGTGCCATCCTTCTCCCCTG............................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ........................................................................CGAGCGAGTCTCGGGCCCTTCCCCAAa........................................................................................................................................................................................ | 27 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................CTGTCGGGCACATGTGCCATCCTTCTCC................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ........................................................................................................................................................GGAACTGTCGGGCACATGTGCCATCCTTCTC.................................................................................................... | 31 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................GAACTGTCGGGCACATGTGCCATCCTT....................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................GCGAGTCTCGGGCCCTTC.............................................................................................................................................................................................. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................................................................................................................................................................CATGTGCCATCCTTCTCCCCTGACTT........................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........TCAACATGTATGTGGGCCAAAGCGAGGAGt..................................................................................................................................................................................................................................................... | 30 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................ACTGTCGGGCACATGTGCCATCCTTCTC.................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................ATGTGCCATCCTTCTCCCCTGACTTG.......................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................CCAAAGCGAGGAGAATGTCCGGGAAG......................................................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................AACTGTCGGGCACATGTGCCATCCTTCT..................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................TGAGTGAGTGAGCGGGGAGAGCGA................................................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................................................................................ACTGTCGGGCACATGTGCCATCCTTa...................................................................................................... | 26 | a | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................................................................................................................................ACTGTCGGGCACATGTGCCATCCTTC...................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................GAGGAACTGTCGGGCACATGTGCC............................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................AGCTCCTTGACACCACTCTgt.................................................................... | 21 | gt | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................GGAACTGTCGGGCACATGTGCCATCCTTC...................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................TGCCAGGGCCAGGGCTGCTGCTCC...................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................CATGTGCCATCCTTCTCCCCTGACTTG.......................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................GGAACTGTCGGGCACATGTGCCATCC......................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................ATGGCCGGGGAGGAACTGTCGGGC...................................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................ACATGTGCCATCCTTCTCCCCTGACTTG.......................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GGAGCTCATCAACATGTATGTGGGCCAAAGCGAGGAGAATGTCCGGGAAGGTGAGTGAGTGAGCGGGGAGAGCGAGCGAGTCTCGGGCCCTTCCCCAACACCATCTTCCCCAGTGGCTGCTCCTGGTCAGCTCAGTGGGCAATGGCCGGGGAGGAACTGTCGGGCACATGTGCCATCCTTCTCCCCTGACTTGAAGCTCCTTGACACCACTCTCCTGCGAGCCTCTTTCTCAGTGTTTGCCAGGGCCAGGGCTGCTGCTCCCTGTATCATCTTCTTTGATGAA ...................................................................((.((((((.....))))....(((((((....((((....((((.((((((((...)).)))).)).))))..))))..)))))))..)).)).((((....))))............................................................................................................. ...................................................................68........................................................................................................174........................................................................................................... |
Size | Perfect hit | Total Norm | Perfect Norm | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | mjTestesWT2() Testes Data. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR042486(GSM539878) mouse ovaries [09-002]. (ovary) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029038(GSM433290) 25dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR028730(GSM400967) Tdrd1-associated. (tdrd1 testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | GSM509279(GSM509279) MVH-/- E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................................................................................CACCACTCTCCTGCGcct................................................................ | 18 | cct | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |