| Gene: Vars2 | ID: uc008cie.1_intron_3_0_chr17_35794264_r.3p | SPECIES: mm9 |
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(3) OTHER.mut |
(13) TESTES |
| TGGGATTGGTTGGTACCTTCAGGATGAGTACAGACATTAGCCACTGGTTGTATAAACCCTTAGGCAACACCTCCCATGCTGCCCTGCTCCTGGAGGTGGAGCAGTGTGCACACTGCTGAGGAGATGATGGAGGTGGAGAGAGGGTAGAGCCAGGAGCATCAATGCCCAGTTTCTCTGCTGACTCTGCGTTTCTTCATCAGGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGA ...................................................................................................................................((((((((((..((((((.(((..(((....))).(((.....)))))).)))))).)))))))))).................................................... ................................................................................................................................129....................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
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| ...............................................................................................................................................................................TGCTGACTCTGCGTTTCTTCATC.................................................... | 23 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TGGAGAGAGGGTAGAGCCAGGA............................................................................................... | 22 | 1 | 3.00 | 3.00 | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TGGAGAGAGGGTAGAGCCAGGAG.............................................................................................. | 23 | 1 | 2.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................TGGAGAGAGGGTAGAGCCAGGAGC............................................................................................. | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TGCTGACTCTGCGTTTCTTC....................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................TGGAGAGAGGGTAGAGCCAGGAGa............................................................................................. | 24 | a | 1.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .....................................................................................................................................TGGAGAGAGGGTAGAGCCAGGAGt............................................................................................. | 24 | t | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ........................................................................................................................................AGAGAGGGTAGAGCCAGGAGC............................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..............................................................................................................CACTGCTGAGGAGATGATGGA....................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................GGAGAGAGGGTAGAGCCAGGAGCATCAAT....................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| .....................................................................................................................................TGGAGAGAGGGTAGAGCCAGG................................................................................................ | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................................................................TGCTGACTCTGCGTTTCTTCAT..................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...............................................................................................................................................................................TGCTGACTCTGCGTTTCTTCATCAG.................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................TGCTGACTCTGCGTTTCTTCATCt................................................... | 24 | t | 1.00 | 4.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................................................................................TGGAGAGAGGGTAGAGCCAGGAtat............................................................................................ | 25 | tat | 1.00 | 3.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................................CCAGCCAGAGCTGGAG....................... | 16 | 14 | 0.07 | 0.07 | - | - | - | - | - | - | - | - | - | - | - | - | 0.07 |
| TGGGATTGGTTGGTACCTTCAGGATGAGTACAGACATTAGCCACTGGTTGTATAAACCCTTAGGCAACACCTCCCATGCTGCCCTGCTCCTGGAGGTGGAGCAGTGTGCACACTGCTGAGGAGATGATGGAGGTGGAGAGAGGGTAGAGCCAGGAGCATCAATGCCCAGTTTCTCTGCTGACTCTGCGTTTCTTCATCAGGAGTTCTGGCGCCAGCCAGAGCTGGAGCGCTGCTTCTCCAGAGTCCAAGA ...................................................................................................................................((((((((((..((((((.(((..(((....))).(((.....)))))).)))))).)))))))))).................................................... ................................................................................................................................129....................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) |
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