| Gene: Ltb | ID: uc008cgp.1_intron_0_0_chr17_35331629_f | SPECIES: mm9 |
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(3) OTHER.mut |
(1) OVARY |
(2) PIWI.ip |
(1) PIWI.mut |
(12) TESTES |
| TCACTGTCCTGGCTGTGCTGGCCTTGGTGCCGCAGGATCAGGGACGTCGGGTGAGTGGCTGCAACGGGCTCCAGAGGGCTGCCTCTTGTGACTGTTTATTTACTTATGGCTGTGCTTCTGCCCACCGCGCTCAGCTGGCCGCTCTCCCCAGAGGGAATGTCTGGTCTGTCTTTGCCTCTCCAGGCAATCCTAGCCTGAATTTTCAAGCCCCTTCCTGGTTGGCTTCTTTTCCAGATAACACTGCACTTGCGTCTCTCTGCCTGCATACATCGTCTTTGTTTGTTCTTCTAGCAAGATGCAGTCTAGGGAGGACACAGCAGGCCCAGGCCTTGGGGCTGGGCTCTACGGTGGGAGGGGTGGAGTTGCCATTAGCCAAATCTGACCTCTGGGCACTCTAACCCTACCTACCCATCCAGGTTGAGAAGATCATTGGCTCAGGAGCACAGGCTCAGAAAAGACTGGATGA .....................................................................................................................................................................................................................................(((((......(((..(((((.((((((((.((((((........((((((.........))))))))))))..)))))))).....)))))..)))...))))).................................................................................................................................... ....................................................................................................................................................................................................................................229.......................................................................................................335................................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCTCAGGAGCACAGGCTCAGAtaaa......... | 28 | taaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .........................................................................................................................................................................................................................................GATAACACTGCACTTcact...................................................................................................................................................................................................................... | 19 | cact | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAAGATCATTGGCTCAGGAGCAC...................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................TTGTGACTGTTTATTTACTTATGGC.................................................................................................................................................................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................................................................................................................................................................ACAGCAGGCCCAGGCCgt....................................................................................................................................... | 18 | gt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAAGATCATTGGCTCAGGAGC........................ | 24 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| TCACTGTCCTGGCTGTGCTGGCCTTGGTGCCGCAGGATCAGGGACGTCGGGTGAGTGGCTGCAACGGGCTCCAGAGGGCTGCCTCTTGTGACTGTTTATTTACTTATGGCTGTGCTTCTGCCCACCGCGCTCAGCTGGCCGCTCTCCCCAGAGGGAATGTCTGGTCTGTCTTTGCCTCTCCAGGCAATCCTAGCCTGAATTTTCAAGCCCCTTCCTGGTTGGCTTCTTTTCCAGATAACACTGCACTTGCGTCTCTCTGCCTGCATACATCGTCTTTGTTTGTTCTTCTAGCAAGATGCAGTCTAGGGAGGACACAGCAGGCCCAGGCCTTGGGGCTGGGCTCTACGGTGGGAGGGGTGGAGTTGCCATTAGCCAAATCTGACCTCTGGGCACTCTAACCCTACCTACCCATCCAGGTTGAGAAGATCATTGGCTCAGGAGCACAGGCTCAGAAAAGACTGGATGA .....................................................................................................................................................................................................................................(((((......(((..(((((.((((((((.((((((........((((((.........))))))))))))..)))))))).....)))))..)))...))))).................................................................................................................................... ....................................................................................................................................................................................................................................229.......................................................................................................335................................................................................................................................. |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR014234(GSM319958) Ovary total. (ovary) | GSM509275(GSM509275) MitoPLD+/+ E16.5 small RNA. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................................................................................................GCATACATCGTCTTTGTTTGTTCTTCTA................................................................................................................................................................................ | 28 | 1 | 4.00 | 4.00 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | 1.00 | - |
| .........................................................................................................................................................................................................................................................................TACATCGTCTTTGTTTGTTCTTCTAGCA............................................................................................................................................................................. | 28 | 1 | 4.00 | 4.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................ACATCGTCTTTGTTTGTTCTTCTAGCA............................................................................................................................................................................. | 27 | 1 | 3.00 | 3.00 | - | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................ACTGCACTTGCGTCTCTCTGCCTGCA......................................................................................................................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................................................................................................................CATCGTCTTTGTTTGTTCTTCTAGCA............................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................ATCGTCTTTGTTTGTTCTTCTAGCAAGA.......................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................................................................................................CATACATCGTCTTTGTTTGTTCTTCTAt................................................................................................................................................................................ | 28 | t | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................CATACATCGTCTTTGTTTGTTCTTCTA................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................................................................................................................................................GCACTCTAACCCTACCTACCCATCCA................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................TTGTTCTTCTAGCAAGATGCAGTCTAGGGA............................................................................................................................................................. | 30 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................................................................GTCTTTGTTTGTTCTTCTAGCAAGATGCA...................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................................................................................................TCGTCTTTGTTTGTTCTTCTAGCA............................................................................................................................................................................. | 24 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................GCCCCTTCCTGGTTGGCTTCTTTTCCAGA....................................................................................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................................................TGCATACATCGTCTTTGTTTGTTCTTCTA................................................................................................................................................................................ | 29 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................................................................................................................................................GGTGGGAGGGGTGGAGTTGCCATTAGCCAA.......................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................................................................................TTGTTCTTCTAGCAAGATGCAGTCTA................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................CGTCTTTGTTTGTTCTTCTAGCAAGATGC....................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................................................................................TGTTTGTTCTTCTAGCAAGATGCAGTC................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |