| Gene: Rps18 | ID: uc008cak.1_intron_2_0_chr17_34089537_r.5p | SPECIES: mm9 |
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(2) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(15) TESTES |
| CGCCGGGCAGATTTCTGTATTAATTAAGAAGTGTCTTCTGCTCACTCAAGGTGAGAATTTGAATATTTGGAAGCATATAGGCATGTGCTGGACCAGAAGTGCTTGCTGCCCTTATCTGTGAGGCAGTCTAGTACTGTCTGAATCCCAGTCCCTCCAAACTGCTTTAAGTGTTAGGAGTCGGTTCTTTATAATTTAAGTTAGTGCTTAAGTCAGAAGGCAAGGTGGGCGTGGGGCCACACTTTGTAGCTGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR037903(GSM510439) testes_rep4. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................................TAGGCATGTGCTGGACCAGAAGTGC.................................................................................................................................................... | 25 | 1 | 8.00 | 8.00 | 6.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................................TGTGCTGGACCAGAAGTGCTTGCTGCCCT.......................................................................................................................................... | 29 | 1 | 4.00 | 4.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................TAGGCATGTGCTGGACCAGAAGTGCT................................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..............................................CAAGGTGAGAATTTGAATATTTGGAAG................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - |
| .........................................................TTTGAATATTTGGAAGCATATAGGCAT...................................................................................................................................................................... | 27 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| .............................................................................TAGGCATGTGCTGGACCAGAAGTGCTT.................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TGTGCTGGACCAGAAGTGCTTGCTGCCC........................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................TGAGAATTTGAATATTTGGAAGCAT.............................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................TGAATATTTGGAAGCATATAGGCATG..................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................TATAGGCATGTGCTGGACCAGAAGTGt.................................................................................................................................................... | 27 | t | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TTTGAATATTTGGAAGCATATAGGCATG..................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| .............................................................................................................................................................................................................TAAGTCAGAAGGCAAGGTGGGCGTGG................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................TTTGAATATTTGGAAGCATATAGGCA....................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................TGCTTTAAGTGTTAGGAGTCGGTTC.................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................TAATTTAAGTTAGTGCTTAAGTCAGAAG.................................. | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................TGTGCTGGACCAGAAGTGCTTGCTG.............................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................AGGTGAGAATTTGAATATTTGGAAGC................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CGCCGGGCAGATTTCTGTATTAATTAAGAAGTGTCTTCTGCTCACTCAAGGTGAGAATTTGAATATTTGGAAGCATATAGGCATGTGCTGGACCAGAAGTGCTTGCTGCCCTTATCTGTGAGGCAGTCTAGTACTGTCTGAATCCCAGTCCCTCCAAACTGCTTTAAGTGTTAGGAGTCGGTTCTTTATAATTTAAGTTAGTGCTTAAGTCAGAAGGCAAGGTGGGCGTGGGGCCACACTTTGTAGCTGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT1() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR037903(GSM510439) testes_rep4. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ............................................................................................................CCCTTATCTGTGAGGCAGTCTA........................................................................................................................ | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .......................................................................................CTGGACCAGAAGTGCTTGCTGCCCTTA........................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..............................................................................................................................................AGTCCCTCCAAACTcgaa.......................................................................................... | 18 | cgaa | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ................................................................................................................................................................GCTTTAAGTGTTAGGAGTCGGTTCTTTA.............................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................................TCCCAGTCCCTCCAAACTGCTTTA.................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |