| Gene: Ankrd47 | ID: uc008bzq.1_intron_0_0_chr17_33947511_f.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(5) PIWI.ip |
(2) PIWI.mut |
(19) TESTES |
| AGGGGGCGGGCTCGGGTGCGGTGCGGGCGCTGCCGGGGCTTCTCATTCAGGTAAAGTCAACCACGCGAGTCCTGGAGGGGAACAGTGGACCCAAGTGTCCGGGAGGGGTGTGATGCTTTTAGCCCCCTTCTATGGGTTCTGTGCGTTGCAACGGGGTGGGCGCCGTGTCCTGTAATGGTGACCATTTGGACATTGGGAGCCTCAGGTGGTTTAAAGCCGACCGGAGAGGGGGGACCCTAGATTATTAGGC ..............................................................................................................................((((((...((((..(((...)))...((((((.((((((........)))))).))))))))))..))))))................................................... .............................................................................................................................126.......................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................TATGGGTTCTGTGCGTTGCAACGGGG.............................................................................................. | 26 | 1 | 9.00 | 9.00 | 4.00 | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................GTCAACCACGCGAGTCCTG................................................................................................................................................................................ | 19 | 1 | 8.00 | 8.00 | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TGGGTTCTGTGCGTTGCAACGGGG.............................................................................................. | 24 | 1 | 3.00 | 3.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TGTAATGGTGACCATTTGGACATTGGG..................................................... | 27 | 1 | 3.00 | 3.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................................................................TATGGGTTCTGTGCGTTGCAACGGGGT............................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................TTTGGACATTGGGAGCCTCAGGTGG......................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................TATGGGTTCTGTGCGTTGCAACGGG............................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................TGTAATGGTGACCATTTGGACATTGG...................................................... | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................TTCTATGGGTTCTGTGCGTTGCAACGG................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TGGGTTCTGTGCGTTGCAACGGGGT............................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................GCTGCCGGGGCTTCTCATTCAGGTAAAGT................................................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ..........................................................................................................................................................................................TGGACATTGGGAGCCTC............................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................TGGACATTGGGAGCCTCAGGTGGTTT...................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ...................................................................................................................................................................................................................TAAAGCCGACCGGAGAGGGGGGACCCTAGAT........ | 31 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................TTGCAACGGGGTGGGCGC....................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................AGTCAACCACGCGAGTCCTGGAGGGGAAC....................................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......GGGCTCGGGTGCGGTGCGGGCGCTG.......................................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................AGGTAAAGTCAACCACGC........................................................................................................................................................................................ | 18 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................CCTGGAGGGGAACAGTGGACCCAAG........................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| AGGGGGCGGGCTCGGGTGCGGTGCGGGCGCTGCCGGGGCTTCTCATTCAGGTAAAGTCAACCACGCGAGTCCTGGAGGGGAACAGTGGACCCAAGTGTCCGGGAGGGGTGTGATGCTTTTAGCCCCCTTCTATGGGTTCTGTGCGTTGCAACGGGGTGGGCGCCGTGTCCTGTAATGGTGACCATTTGGACATTGGGAGCCTCAGGTGGTTTAAAGCCGACCGGAGAGGGGGGACCCTAGATTATTAGGC ..............................................................................................................................((((((...((((..(((...)))...((((((.((((((........)))))).))))))))))..))))))................................................... .............................................................................................................................126.......................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesWT4() Testes Data. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014236(GSM319960) 10 dpp total. (testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR014232(GSM319956) 16.5 dpc MILI. (mili testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................CCCTTCTATGGGTTCaag............................................................................................................... | 18 | aag | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ......................GCGGGCGCTGCCGGGGCTTCTCATTCA......................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................GGCTTCTCATTCAGGTAAAGTCAACC............................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................GCCGGGGCTTCTCATTCAGGTAAAGTCA............................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |