| Gene: March2 | ID: uc008bzi.1_intron_5_0_chr17_33846918_r.5p | SPECIES: mm9 |
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(6) OTHER.mut |
(3) PIWI.ip |
(2) PIWI.mut |
(19) TESTES |
| CAGGGAGAACCGAGGGGCCTGCGCGGTCGCCCGGCCCGGCCGCGGAACAGGTAGGCACGGAACAGCGAATGGGCCTGACCCGAGTATGTAGGCAGGTTTCCCAGGTTCCGGGTTCGAGCCTCCGGCTGAGTACTCGAGCGGGACAGATAGGGCGCTACCCTTGGCCTTACTTAGCCCTGCTCAGGACGCAGGCACCTCAATTATCATTTCAAGGTTGGTGAGAGGTCTCCGAGCCTCGCCACGCAGGAGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................................TGAGTACTCGAGCGGGACAGATAGG................................................................................................... | 25 | 1 | 14.00 | 14.00 | 3.00 | 2.00 | 2.00 | 3.00 | 1.00 | 2.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAGTACTCGAGCGGGACAGATAGGGC................................................................................................. | 27 | 1 | 12.00 | 12.00 | 10.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ...........................................................................................................................................................................................................TCATTTCAAGGTTGGTGAGAGGTC....................... | 24 | 1 | 3.00 | 3.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ..............GGGCCTGCGCGGTCGCCCGGCCCGGCCGCGG............................................................................................................................................................................................................. | 31 | 1 | 2.00 | 2.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................CGCGGTCGCCCGGCgccg................................................................................................................................................................................................................... | 18 | gccg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................................................................TGAGTACTCGAGCGGGACAGATAGGG.................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................TGAGTACTCGAGCGGGACAGATAG.................................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................AGGCACGGAACAGCGAATGGG................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................................GTAGGCACGGAACAGCG....................................................................................................................................................................................... | 17 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ...............................................CAGGTAGGCACGGAACAGCGAATGGGCCT.............................................................................................................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TGTAGGCAGGTTTCCCAGGTTCCGG........................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................CGGTCGCCCGGCCCGGCCGCGGA............................................................................................................................................................................................................ | 23 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................GAGTACTCGAGCGGGACAGATAGGGC................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................AGGTTCCGGGTTCGggtc.................................................................................................................................. | 18 | ggtc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ......................................GCCGCGGAACAGGTAGGCACGGAACAGC........................................................................................................................................................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ..........................................CGGAACAGGTAGGCACGGAACAGC........................................................................................................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................CCGGCTGAGTACTCGAGCGGGACAG........................................................................................................ | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ..GGGAGAACCGAGGGGCCTGCG................................................................................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CAGGGAGAACCGAGGGGCCTGCGCGGTCGCCCGGCCCGGCCGCGGAACAGGTAGGCACGGAACAGCGAATGGGCCTGACCCGAGTATGTAGGCAGGTTTCCCAGGTTCCGGGTTCGAGCCTCCGGCTGAGTACTCGAGCGGGACAGATAGGGCGCTACCCTTGGCCTTACTTAGCCCTGCTCAGGACGCAGGCACCTCAATTATCATTTCAAGGTTGGTGAGAGGTCTCCGAGCCTCGCCACGCAGGAGA |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT4() Testes Data. (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069811(GSM610967) small RNA sequencing; sample 3. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | mjTestesWT2() Testes Data. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................................................................................................CTCAATTATCATTTCcaca........................................ | 19 | caca | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................GGTTCGAGCCTCCagg............................................................................................................................... | 16 | agg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...........................................GGAACAGGTAGGCACGGAACAGCGAA..................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |