| Gene: Ppard | ID: uc008bqk.1_intron_6_0_chr17_28435980_f.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(5) PIWI.ip |
(1) PIWI.mut |
(16) TESTES |
| CGATGACAGTGACCTGGCGCTCTTCATCGCGGCCATCATTCTGTGTGGAGGTGAGGGGGCGGAGCCGCACTGCCAGGGACCAAACCTGACCTCAGACAGTGTAGCACAGAGCACATGTGCAGAACCAGCTGCATCTGGTTGGACAGACAGAGGTGTACCTTGCTGGGATTATAGCTGGATGGCGGGATGCTTGTCTAGCAAGCGGGAGGCGCTGAGTCCAATCCCCAGTACTGGGGCGTGGGGAAAAGAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................................................................................................TGGTTGGACAGACAGAGGTGTACCTTGC....................................................................................... | 28 | 1 | 4.00 | 4.00 | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................................................................................TGGTTGGACAGACAGAGGTGTACCTTGCT...................................................................................... | 29 | 1 | 4.00 | 4.00 | - | 3.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................TGACCTCAGACAGTGTAGCACAGAGC.......................................................................................................................................... | 26 | 1 | 3.00 | 3.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................TGCATCTGGTTGGACAGACAGAGGTG............................................................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................TGGGATTATAGCTGGATGGCGGGATc............................................................. | 26 | c | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ................................................................................................CAGTGTAGCACAGAGCACATGTGCAGA............................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................................................................................................................................TGGATGGCGGGATGCTTGTCTAGCAA................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................ACCTGACCTCAGACAcc...................................................................................................................................................... | 17 | cc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| ......................................................................................TGACCTCAGACAGTGTAGCACAGAGCA......................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...................................................................................................TGTAGCACAGAGCACATGTGCAGAACCAGC......................................................................................................................... | 30 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ................................................................................................................................................................TGCTGGGATTATAGCTGGATGGCGG................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...................................TCATTCTGTGTGGAGGTGAGGGGGC.............................................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ...................................................................................................................................................................TGGGATTATAGCTGGATGGCGGGAT.............................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................GGGACCAAACCTGACCTCAGACAGTGTA................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................TGCTGGGATTATAGCTGGATGGCGGG................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................GCTGCATCTGGTTGGcatc........................................................................................................ | 19 | catc | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................................TTCTGTGTGGAGGTGAGGGGGCGGA........................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| CGATGACAGTGACCTGGCGCTCTTCATCGCGGCCATCATTCTGTGTGGAGGTGAGGGGGCGGAGCCGCACTGCCAGGGACCAAACCTGACCTCAGACAGTGTAGCACAGAGCACATGTGCAGAACCAGCTGCATCTGGTTGGACAGACAGAGGTGTACCTTGCTGGGATTATAGCTGGATGGCGGGATGCTTGTCTAGCAAGCGGGAGGCGCTGAGTCCAATCCCCAGTACTGGGGCGTGGGGAAAAGAA |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | mjTestesWT2() Testes Data. (testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR029036(GSM433288) 18dpp_hetero_tdrd6-KO. (tdrd6 testes) | mjTestesKO5() Testes Data. (Zcchc11 testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ................GCGCTCTTCATCGCGGCCATCATTCTG............................................................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | 1.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ..........ACCTGGCGCTCTTCATCGCGGCCATCAa.................................................................................................................................................................................................................... | 28 | a | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .......................TCATCGCGGCCATCATTCTGTGTGGA......................................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............GGCGCTCTTCATCGCGGCCATCATTCTG............................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................GACCAAACCTGACCTCAGACAGTGTA................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................CCTCAGACAGTGTAGCACAGAGCACA....................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |