| Gene: BC048715 | ID: uc008bcm.1_intron_0_0_chr17_26016114_r.3p | SPECIES: mm9 |
|
|
|
(1) OTHER.mut |
(3) PIWI.ip |
(10) TESTES |
| TTGACTAAGGTGACTGGGGTTGACTAAGGTGACTGTGTGACCTTAGTACTCCTACTGTTCAAAATGCACAGCCACAGTTTTTCACAGGGGAGGAAGCTTTGAAAAAGGCAGCTACCTCTCCCAGGATAGAGAGGCAGAGTAGTGCATAGGCAAGGCTGGGTAGGGGGTCAGGGCTCCACTAAACTGTCCCTGTCCCTCAGGACTGTGCGGCATCCGAGAAGTGCTGCACCAATGTGTGTGGGCTGCAGAG ..................................................................................................................((((((((((.........(((......)))..........))))).))))).................................................................................... .................................................................................................................114...........................................................176........................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................TCCCAGGATAGAGAGGCAGAGTAGTGC......................................................................................................... | 27 | 1 | 6.00 | 6.00 | 4.00 | - | - | - | 1.00 | - | - | - | 1.00 | - |
| ......................................................................................................................TCCCAGGATAGAGAGGCAGAGTAGTG.......................................................................................................... | 26 | 1 | 4.00 | 4.00 | 3.00 | - | - | - | 1.00 | - | - | - | - | - |
| ..............................................................................TTTTCACAGGGGAGGAAGCTTTGAAA.................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | 2.00 | - | - | - | - | - | - | - |
| .........................................................................................................................CAGGATAGAGAGGCAGAGTAGTGCAaa...................................................................................................... | 27 | aa | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - |
| ...................................................................................................TGAAAAAGGCAGCTACCTCTCCCAGGA............................................................................................................................ | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - |
| ..............................................................................................................................TAGAGAGGCAGAGTAGTGCATAGGCAA................................................................................................. | 27 | 1 | 2.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................TCCCAGGATAGAGAGGCAGAGTAGT........................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| ..................................................................................................................................................TAGGCAAGGCTGGGTAGGGGGTCAGG.............................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ...................................TGTGACCTTAGTACTCCTACTGTTCAA............................................................................................................................................................................................ | 27 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| .....TAAGGTGACTGGGGTTGACTAAGGTGA.......................................................................................................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| .....................................................................................................................................................................................................CAGGACTGTGCGGCATCCGAGAAGT............................ | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ...............................................................................................................................AGAGAGGCAGAGTAGTGCATAGGCAA................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................................................................................................TCCCAGGATAGAGAGGCAGAGTAGTGt......................................................................................................... | 27 | t | 1.00 | 4.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| ....................................................................................................................TCTCCCAGGATAGAGAGGCAGAGTAGTG.......................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ......................................................................................................................................................................................................AGGACTGTGCGGCATCCGAGAAGTGCTG........................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - |
| ..........................................................................................................................................................................................TCCCTGTCCCTCAGGACTGTGCGGCA...................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ..........................................................................................................................................................................................TCCCTGTCCCTCAGGACTGTGCGGCATC.................................... | 28 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ...................................................................................................TGAAAAAGGCAGCTACCTCTCCCAGG............................................................................................................................. | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................................TCCGAGAAGTGCTGCACCAATGTGTG............ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 |
| ...........................................................................................................................................................................................CCCTGTCCCTCAGGACTGTGCGGCATC.................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ...............................................................................................................................AGAGAGGCAGAGTAGTGCATAGGCAAG................................................................................................ | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TCCCAGGATAGAGAGGCAGAGTAGTGa......................................................................................................... | 27 | a | 1.00 | 4.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................................................................TCAGGACTGTGCGGCATCCGAGAAG............................. | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................TAAACTGTCCCTGTCCCTCAGGACTGTGCGGC....................................... | 32 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |
| ...ACTAAGGTGACTGGGGTTGACTAAGGTG........................................................................................................................................................................................................................... | 28 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................................CTGTCCCTCAGGACTGTGCGGCATC.................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - |
| ..................................................................................................................................................TAGGCAAGGCTGGGTAG....................................................................................... | 17 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | 0.50 | - | - | - |
| ..........................AGGTGACTGTGTGAC................................................................................................................................................................................................................. | 15 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | 0.12 | - | - | - |
| TTGACTAAGGTGACTGGGGTTGACTAAGGTGACTGTGTGACCTTAGTACTCCTACTGTTCAAAATGCACAGCCACAGTTTTTCACAGGGGAGGAAGCTTTGAAAAAGGCAGCTACCTCTCCCAGGATAGAGAGGCAGAGTAGTGCATAGGCAAGGCTGGGTAGGGGGTCAGGGCTCCACTAAACTGTCCCTGTCCCTCAGGACTGTGCGGCATCCGAGAAGTGCTGCACCAATGTGTGTGGGCTGCAGAG ..................................................................................................................((((((((((.........(((......)))..........))))).))))).................................................................................... .................................................................................................................114...........................................................176........................................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR051940(GSM545784) 18-32 nt total small RNAs (Mov10l+/-). (testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................TGTGACCTTAGTACTCCTACTGTTCA............................................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - |
| ......................................GACCTTAGTACTCCTACTGTTCAAAA.......................................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - |
| .................................................................................................................................................................................AACTGTCCCTGTCCCTCcacc.................................................... | 21 | cacc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| .......................................................................CACAGTTTTTCACAGGGGAGGAAt........................................................................................................................................................... | 24 | t | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ................................................CTCCTACTGTTCAAAATGCACAGCCA................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................CAGTTTTTCACAGGGGAGGAAGCTTTGAA................................................................................................................................................... | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - |
| ..........................................TTAGTACTCCTACTGTTCAAAATGC....................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - |