| Gene: Zfp598 | ID: uc008axn.1_intron_4_0_chr17_24814998_f.3p | SPECIES: mm9 |
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(5) OTHER.mut |
(3) OVARY |
(5) PIWI.ip |
(2) PIWI.mut |
(25) TESTES |
| CAATTGGGAACTGATTTTTAGAGGTTACGGCTGGTTTGGATTCTGCGGCGTCTGGGCCTACCCTTGTGGATCGTAAGCTGTTGGGGGTGGAGAAGCCTCTGCCCTCCAGACAGGAGCGCTGGCCTCAGTGTGGTCTGGACAGCAGTTCTTTTGTCCTATTGGTTGACCCGGGAAAGTGACAGGCTATGTACTGACCACAGGAGTCGTCAGTGGTGAGGACTACGAGGAGGTGGACAGGTACAATCGCCAG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR037898(GSM510434) ovary_rep3. (ovary) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR037899(GSM510435) ovary_rep4. (ovary) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037903(GSM510439) testes_rep4. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................CAGGCTATGTACTGACCACAG.................................................. | 21 | 1 | 6.00 | 6.00 | - | - | - | 3.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - |
| ...................................................................................................................................................................................CAGGCTATGTACTGACCACAGt................................................. | 22 | t | 3.00 | 6.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TACCCTTGTGGATCGTAAGCTGTTGGG..................................................................................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | - | - | - | - | 1.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................................................TGGTGAGGACTACGAGGAGGT................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................TGAGGACTACGAGGAGGTGGACAGGT........... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................TAAGCTGTTGGGGGTGGA............................................................................................................................................................... | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................TTCTGCGGCGTCTGGGCCTAC............................................................................................................................................................................................. | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ................................................................TGTGGATCGTAAGCTGTTGGG..................................................................................................................................................................... | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TACGAGGAGGTGGACAGGTACAATC..... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ............................................................................GCTGTTGGGGGTGGAGAAGCCT........................................................................................................................................................ | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ...............................................................TTGTGGATCGTAAGCTGTTGGGGGT.................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................................................GCTATGTACTGACCACAGt................................................. | 19 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ............................................................................................................................................................................................................................TACGAGGAGGTGGACAGGTACAATCGC... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| ........................................TTCTGCGGCGTCTGGGCCTACCCTTG........................................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................CAGGCTATGTACTGACCACAGc................................................. | 22 | c | 1.00 | 6.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................TGTGGTCTGGACAGCAGTTCTTTTGTCCT............................................................................................. | 29 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................................................AGTGGTGAGGACTACGAGGAGGTGGAC............... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................TGTGGATCGTAAGCTGTTGGGGGTGG................................................................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................TATTGGTTGACCCGGGAAAGTGACAG.................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TACCCTTGTGGATCGTAAGCTGTTGG...................................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................CGGCTGGTTTGGATTCTGC............................................................................................................................................................................................................ | 19 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................TACCCTTGTGGATCGTAAGCTGTTG....................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................................................................................................................GAGGAGGTGGACAGGTACAA....... | 20 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................GGTTTGGATTCTGCttgt........................................................................................................................................................................................................ | 18 | ttgt | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ...........................................................................................................................................................................................................................................AGGTACAATCGCtttg | 16 | tttg | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| ...............................................................TTGTGGATCGTAAGCTGTTGGGGGTG................................................................................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .....................................................GGGCCTACCCTTGTGGATCGTAAGCTGTTGGG..................................................................................................................................................................... | 32 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TCTTTTGTCCTATTGGTTGACCCGGG.............................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| CAATTGGGAACTGATTTTTAGAGGTTACGGCTGGTTTGGATTCTGCGGCGTCTGGGCCTACCCTTGTGGATCGTAAGCTGTTGGGGGTGGAGAAGCCTCTGCCCTCCAGACAGGAGCGCTGGCCTCAGTGTGGTCTGGACAGCAGTTCTTTTGTCCTATTGGTTGACCCGGGAAAGTGACAGGCTATGTACTGACCACAGGAGTCGTCAGTGGTGAGGACTACGAGGAGGTGGACAGGTACAATCGCCAG |
Size | Perfect hit | Total Norm | Perfect Norm | SRR037897(GSM510433) ovary_rep2. (ovary) | SRR037898(GSM510434) ovary_rep3. (ovary) | GSM475279(GSM475279) Miwi-IP. (miwi testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR037899(GSM510435) ovary_rep4. (ovary) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | GSM475280(GSM475280) Mili-IP. (mili testes) | SRR037901(GSM510437) testes_rep2. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR069810(GSM610966) small RNA sequencing; sample 2. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR037903(GSM510439) testes_rep4. (testes) | GSM475281(GSM475281) total RNA. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | GSM509280(GSM509280) small RNA cloning by length. (testes) | mjTestesKO7() Testes Data. (Zcchc11 testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR051941(GSM545785) 18-32 nt total small RNAs (Mov10l-/-). (mov10L testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | GSM509277(GSM509277) small RNA cloning by length. (piwi testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .......................................................ACCCTTGTGGATCGttgt................................................................................................................................................................................. | 18 | ttgt | 58.00 | 0.00 | 18.00 | 12.00 | 9.00 | - | 5.00 | - | 3.00 | 4.00 | 4.00 | - | - | - | - | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................ACCCTTGTGGATCGTttgt................................................................................................................................................................................ | 19 | ttgt | 5.00 | 0.00 | 1.00 | 1.00 | 1.00 | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................ACCCTTGTGGATCGTttg................................................................................................................................................................................ | 18 | ttg | 2.00 | 0.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................ACCCTTGTGGATCGttga................................................................................................................................................................................. | 18 | ttga | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................ACCCTTGTGGATCGttgg................................................................................................................................................................................. | 18 | ttgg | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................TACCCTTGTGGATCGtga................................................................................................................................................................................. | 18 | tga | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................ACCCTTGTGGATCGttgc................................................................................................................................................................................. | 18 | ttgc | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |