| Gene: Wtap | ID: uc008als.1_intron_1_0_chr17_13162426_r.3p | SPECIES: mm9 |
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(4) OTHER.mut |
(1) PIWI.mut |
(14) TESTES |
| GTTTATTTTTGCTGTTCTTGGTAAAAATACTGAAGTGCAGAAGATGGACATGTTCCAGAAAAGAAGATGGTAATTACAGGGTGGCATCTCTGTAACATAGTTATGTTCTGTACGTGTTGATGCTCCAGTTATTAAATTGTGAGCAAAGGCTAGAGAGAGCTTTGTCTTCATCTTGTGATGATAGGCTCTTTCCTTTGCAGCCAAACAGGCAAAAAGCTAATGGCGAAGTGTCGAATGCTTATCCAGGAGA ..............................................................................................................................................(((((((....(((((((((.....(((((....))))).)))))))))))))))).................................................... ........................................................................................................................................137............................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
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| ....................................................................................................................................................................................ATAGGCTCTTTCCTTTGCAGa................................................. | 21 | a | 12.00 | 0.00 | 10.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - |
| ....................................................................................................................................................................................ATAGGCTCTTTCCTTTGCAGt................................................. | 21 | t | 10.00 | 0.00 | 9.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................GATAGGCTCTTTCCTTTGCAGa................................................. | 22 | a | 8.00 | 0.00 | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................................................TGATAGGCTCTTTCCTTTGCAGat................................................ | 24 | at | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................AGCAAAGGCTAGAGAGAGCTTTGT..................................................................................... | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................TAGGCTCTTTCCTTTGCAGt................................................. | 20 | t | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| .......................................................................................................................................................................................................................GCTAATGGCGAAGTGTCGAA............... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................................................AATGGCGAAGTGTCGAAT.............. | 18 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| ...............................................................................................................................................................................................................................CGAAGTGTCGAATGCTTATCCAGGAG. | 26 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 |
| GTTTATTTTTGCTGTTCTTGGTAAAAATACTGAAGTGCAGAAGATGGACATGTTCCAGAAAAGAAGATGGTAATTACAGGGTGGCATCTCTGTAACATAGTTATGTTCTGTACGTGTTGATGCTCCAGTTATTAAATTGTGAGCAAAGGCTAGAGAGAGCTTTGTCTTCATCTTGTGATGATAGGCTCTTTCCTTTGCAGCCAAACAGGCAAAAAGCTAATGGCGAAGTGTCGAATGCTTATCCAGGAGA ..............................................................................................................................................(((((((....(((((((((.....(((((....))))).)))))))))))))))).................................................... ........................................................................................................................................137............................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | mjTestesWT1() Testes Data. (testes) | mjTestesWT4() Testes Data. (testes) | mjTestesWT3() Testes Data. (testes) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | SRR248525(GSM733813) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | mjTestesKO8() Testes Data. (Zcchc11 testes) | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR029043(GSM433295) 18.5dpc_homo_tdrd1-KO. (tdrd1 testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR037902(GSM510438) testes_rep3. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) |
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| ...........................................................................................................................................................................................................................CGAAGTGTCGAaacg................ | 15 | aacg | 4.00 | 0.00 | - | - | - | 1.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - |
| .....................................................................................................................................................................................AGGCTCTTTCCTTTGCAc................................................... | 18 | c | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ......................ATACTGAAGTGCAGgcta.................................................................................................................................................................................................................. | 18 | gcta | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |