| Gene: T2 | ID: uc008ajp.1_intron_1_0_chr17_8589740_f.5p | SPECIES: mm9 |
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(4) OTHER.mut |
(6) PIWI.ip |
(3) PIWI.mut |
(21) TESTES |
| GCCCGCACCAACCTGGCTTGGATCCACCCAAGCATCGAGGGGACACAGCGGTACGTTTTCACAGCGTGTGCACGTGTGCGCGCATGCGGGCTTACGAAGTTATCGAACGCCATGGTGCTCGATGTGACGGGTTTTGATTAGAGGTGTGATTTGGAGATTCGGGTTGGTGTGTCCTGAAGTCGATGCTGAATGAGGTGTAACTGCCAAGACACAGATCTTTTGAATTAGGGTTTCCATGGTGCCTGTAATG .....................................................................................................................((((......(((((((((((((......)))))..)))))))).......(((((........)))))....))))........................................................ .....................................................................................................................118...............................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT4() Testes Data. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) |
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| ..............................................................................................................................................................................TGAAGTCGATGCTGAATGAGGTGTA................................................... | 25 | 1 | 36.00 | 36.00 | 5.00 | 5.00 | 6.00 | 1.00 | 3.00 | 4.00 | 7.00 | - | 1.00 | 2.00 | - | 2.00 | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................................................TGTCCTGAAGTCGATGCTGAATGAGGTG..................................................... | 28 | 1 | 9.00 | 9.00 | - | 5.00 | 1.00 | - | - | - | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGAAGTCGATGCTGAATGAGGTGTAA.................................................. | 26 | 1 | 7.00 | 7.00 | - | 2.00 | 3.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TGAATTAGGGTTTCCATGGTGCCTG..... | 25 | 1 | 5.00 | 5.00 | - | - | - | 3.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 |
| .........................................................................................................................................................................TGTCCTGAAGTCGATGCTGAATGAGGT...................................................... | 27 | 1 | 3.00 | 3.00 | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................TGTGACGGGTTTTGATTAGAGGTGTGA..................................................................................................... | 27 | 1 | 3.00 | 3.00 | - | 1.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................................................................................TTAGAGGTGTGATTTGGAGATTCGGGT...................................................................................... | 27 | 1 | 3.00 | 3.00 | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................................................................TCCTGAAGTCGATGCTGAATGAGGTG..................................................... | 26 | 1 | 3.00 | 3.00 | - | 1.00 | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................TGCGGGCTTACGAAGTTATCGAACGC............................................................................................................................................ | 26 | 1 | 3.00 | 3.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................TCGATGTGACGGGTTTTGATTAGAGG.......................................................................................................... | 26 | 1 | 3.00 | 3.00 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................TCGAGGGGACACAGCGGTACGTTTTCA............................................................................................................................................................................................. | 27 | 1 | 2.00 | 2.00 | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................TCGAGGGGACACAGCGGTACGTTTTC.............................................................................................................................................................................................. | 26 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................TGATTAGAGGTGTGATTTGGAGATT........................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................TCTTTTGAATTAGGGTTTCCATGGTG......... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................TGATTAGAGGTGTGATTTGGAGATTC.......................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | 1.00 | - | - | - | - |
| .........................................................................................................................................................................TGTCCTGAAGTCGATGCTGAATGAGG....................................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TAGAGGTGTGATTTGGAGATTCGGGTT..................................................................................... | 27 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................................................................................................................................CTTTTGAATTAGGGTgtg................ | 18 | gtg | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - |
| ................................................................................................................................................TGTGATTTGGAGATTCGGGTTGGTG................................................................................. | 25 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................TGCTGAATGAGGTGTAACTGCCAAGA......................................... | 26 | 1 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................................TGAATGAGGTGTAACTGCCAAGACAC...................................... | 26 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................TGTGACGGGTTTTGATTAGAGGTGTG...................................................................................................... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ..................................TCGAGGGGACACAGCGGTACGTTTTCAC............................................................................................................................................................................................ | 28 | 1 | 2.00 | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................TGTGACGGGTTTTGATTAGAGGTGT....................................................................................................... | 25 | 1 | 2.00 | 2.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGAAGTCGATGCTGAATGAGGTGT.................................................... | 24 | 1 | 2.00 | 2.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................TGAATTAGGGTTTCCATGGTGCCTGT.... | 26 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................GTCCTGAAGTCGATGCTGAATGAGG....................................................... | 25 | 1 | 2.00 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................TGCGGGCTTACGAAGTTATCGAA............................................................................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................................................GTCCTGAAGTCGATGCTGAATGAGGTG..................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................TGTGACGGGTTTTGATTAGAGGTG........................................................................................................ | 24 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| .......................................................................................................................................................................................................................TCTTTTGAATTAGGGTTTCCATGGTGCC....... | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................CCCAAGCATCGAGGGGACACAGCGG....................................................................................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGAAGTCGATGCTGAATGAGGTatc................................................... | 25 | atc | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................TGATTAGAGGTGTGATTTGGAGA............................................................................................. | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................................TGTAACTGCCAAGACACAGATCTTTTGAATT........................ | 31 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................TGTGACGGGTTTTGATTAGAGGT......................................................................................................... | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGAAGTCGATGCTGAATGAGGTGTAAC................................................. | 27 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TTTGATTAGAGGTGTGATTTGGAGAT............................................................................................ | 26 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGAAGTCGATGCTGAATGAGGTGTAACa................................................ | 28 | a | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGAAGTCGATGCTGAATGAGGagta................................................... | 25 | agta | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .............................................................................................................................................................................CTGAAGTCGATGCTGAATGAGGTGTA................................................... | 26 | 1 | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGAAGTCGATGCTGAATGAGGTGTAACT................................................ | 28 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - |
| ..............................................................................................................................................................................TGAAGTCGATGCTGAATGAGGTG..................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................................CGGGTTTTGATTAGAGGTGTGATTTG................................................................................................. | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................TACGAAGTTATCGAACGCCATGGTGCTC.................................................................................................................................. | 28 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGAAGTCGATGCTGAATGAGGTGca................................................... | 25 | ca | 1.00 | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................TGAAGTCGATGCTGAATGAGGTGTAgaa................................................ | 28 | gaa | 1.00 | 36.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - |
| ..........................................................................................................................................TAGAGGTGTGATTTGGAGATTCGGGT...................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................TTTGATTAGAGGTGTGATTTGGAGA............................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - |
| .......................................................................................................................................................................................TGCTGAATGAGGTGTAACTGCCAcgcc........................................ | 27 | cgcc | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................CCTGAAGTCGATGCTGAATGAGGTG..................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ........................................................................................................GAACGCCATGGTGCTCGATGTGACGG........................................................................................................................ | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................TTACGAAGTTATCGAACGCCATGGT...................................................................................................................................... | 25 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| GCCCGCACCAACCTGGCTTGGATCCACCCAAGCATCGAGGGGACACAGCGGTACGTTTTCACAGCGTGTGCACGTGTGCGCGCATGCGGGCTTACGAAGTTATCGAACGCCATGGTGCTCGATGTGACGGGTTTTGATTAGAGGTGTGATTTGGAGATTCGGGTTGGTGTGTCCTGAAGTCGATGCTGAATGAGGTGTAACTGCCAAGACACAGATCTTTTGAATTAGGGTTTCCATGGTGCCTGTAATG .....................................................................................................................((((......(((((((((((((......)))))..)))))))).......(((((........)))))....))))........................................................ .....................................................................................................................118...............................................................................200................................................ |
Size | Perfect hit | Total Norm | Perfect Norm | SRR248523(GSM733811) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR034118(GSM466728) Mili IP_Tdrd9+/- replicate1. (mili testes) | SRR034119(GSM466729) Mili IP_Tdrd9+/- replicate2. (mili testes) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR014236(GSM319960) 10 dpp total. (testes) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | mjTestesWT4() Testes Data. (testes) | SRR014231(GSM319955) 16.5 dpc total. (testes) | SRR034121(GSM466731) Mili IP_Tdrd9-/- replicate2. (mili testes) | SRR034120(GSM466730) Mili IP_Tdrd9-/- replicate1. (mili testes) | SRR028732(GSM400969) Mili-Tdrd1 KO associated. (mili testes) | mjTestesKO6() Testes Data. (Zcchc11 testes) | SRR029037(GSM433289) 18dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR014233(GSM319957) 16.5 dpc MIWI2. (miwi2 testes) | SRR014230(GSM319954) 10 dpp Dnmt3L-KO MILI. (mili testes) | GSM509278(GSM509278) small RNA cloning by length. (piwi testes) | SRR029042(GSM433294) 18.5dpc_hetero_tdrd1-KO. (tdrd1 testes) | SRR014229(GSM319953) 10 dpp MILI. (mili testes) | SRR014235(GSM319959) 2 dpp total. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR029040(GSM433292) 6w_hetero_tdrd6-KO. (tdrd6 testes) |
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